RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM102AQ5T9C2 384 aaPredicted RBP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLC13A5Q86YT5 568 aaPredicted RBP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 TTC39CQ8N584 583 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 PIWIL1Q96J94 861 aaKnown RBP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 HERPUD2Q9BSE4 406 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 NFU1Q9UMS0 254 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 TIMM13Q9Y5L4 95 aaPredicted RBP11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 CYB561D2O14569 222 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 PSMA2P25787 234 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 PNPLA4P41247 253 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 TXNRD3NBQ6F5E7 133 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 OSTM1Q86WC4 334 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 RHOT1Q8IXI2 618 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 IFT20Q8IY31 132 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 PRELID2Q8N945 189 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 HASPINQ8TF76 798 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 I3L4J1 428 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 RARAP10276 462 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 LRPAP1P30533 357 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 SNX1Q13596 522 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 CASP8Q14790 479 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM183BPQ6ZVS7 135 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 HDXQ7Z353 690 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 C3orf58Q8NDZ4 430 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 C1orf54Q8WWF1 131 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 MAGOHBQ96A72 148 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM118BQ9BPY3 351 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 MIS12Q9H081 205 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 KIAA1257Q9ULG3 409 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
SMPD4P1-201ENST00000416717 SIGLEC16A6NMB1 481 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 KBTBD13C9JR72 458 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PODXLO00592 558 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 RALAP11233 206 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 KCNJ1P48048 391 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 DSC3Q14574 896 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 MTFR1Q15390 333 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 TAF5Q15542 800 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SMTNL2Q2TAL5 461 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 KAZNQ674X7 775 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 TTC27Q6P3X3 843 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SND1Q7KZF4 910 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 ANKS1BQ7Z6G8 1248 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 UNC93AQ86WB7 457 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SCUBE3Q8IX30 993 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 CCDC26Q8TAB7 109 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLC2A14Q8TDB8 520 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 B3GNT5Q9BYG0 378 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 ZWILCHQ9H900 591 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 GDF3Q9NR23 364 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLC38A7Q9NVC3 462 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PTPN22Q9Y2R2 807 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 GIT1Q9Y2X7 761 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 A0A0U1RQF3 1178 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 CLDN5O00501 218 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PSTPIP1O43586 416 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM153BP0C7A2 387 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 DR1Q01658 176 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 ZNF268Q14587 947 aaPredicted RBP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 CDO1Q16878 200 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM153CQ494X1 144 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 DSTYKQ6XUX3 929 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 MAATS1Q7Z4T9 603 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 ATG4AQ8WYN0 398 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SENP8Q96LD8 212 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 DEFB118Q96PH6 123 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 OGFRQ9NZT2 677 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PCSK1NQ9UHG2 260 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 FAM153AQ9UHL3 310 aa11.25□□□□□ -0.61
SMPD4P1-201ENST00000416717 PHF2O75151 1096 aa11.24□□□□□ -0.61
SMPD4P1-201ENST00000416717 KRT1P04264 644 aa11.24□□□□□ -0.61
SMPD4P1-201ENST00000416717 KRT10P13645 584 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms