RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 BTBD3Q9Y2F9 522 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GPR55Q9Y2T6 319 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PAXBP1Q9Y5B6 917 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FHOD1Q9Y613 1164 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CAPN7Q9Y6W3 813 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TRAV34A0A0B4J273 112 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 A0A1W2PNR3 127 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SYCE3A1L190 88 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FAM234BA2RU67 622 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FAM86B1E9PN63 330 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 H0YCG3 227 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 H0YIV9 168 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FCHO1O14526 889 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC27A2O14975 620 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 POLR2DO15514 142 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 BUB1O43683 1085 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC25A17O43808 307 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 REC8O95072 547 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PRKCBP05771 671 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 GAAP10253 952 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 KITP10721 976 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ESRRAP11474 423 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 BMP1P13497 986 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PRG2P13727 222 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FDPSP14324 419 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 JUPP14923 745 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 CCNA2P20248 432 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 AOAHP28039 575 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MCM5P33992 734 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RFC4P35249 363 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 WASP42768 502 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 STAT5BP51692 787 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 CDR1P51861 262 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PPP5CP53041 499 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SEC24CP53992 1094 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ACTR1AP61163 376 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RPS3AP61247 264 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PTSQ03393 145 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RNASELQ05823 741 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RUNX1T1Q06455 604 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 C19orf57Q0VDD7 668 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 GALNT2Q10471 571 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TBL3Q12788 808 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 DUSP4Q13115 394 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 AIMP2Q13155 320 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 KCNAB2Q13303 367 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ADAM9Q13443 819 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TNFAIP1Q13829 316 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FRG1Q14331 258 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 CRYMQ14894 314 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ARHGEF6Q15052 776 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TESK1Q15569 626 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ZRSR1Q15695 479 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 NTRK2Q16620 822 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TYSND1Q2T9J0 566 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 LRRC23Q53EV4 343 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC44A4Q53GD3 710 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 C9orf152Q5JTZ5 239 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ERMARDQ5T6L9 678 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 COL13A1Q5TAT6 717 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 C12orf60Q5U649 245 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FCRLBQ6BAA4 426 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TTC19Q6DKK2 380 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TMEM132EQ6IEE7 984 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MFSD5Q6N075 450 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 CAVIN1Q6NZI2 390 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FAM111BQ6SJ93 734 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 LRSAM1Q6UWE0 723 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MPRIPQ6WCQ1 1025 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MEX3BQ6ZN04 569 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MSANTD1Q6ZTZ1 278 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ESPNLQ6ZVH7 1005 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ADGRA1Q86SQ6 560 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MICU3Q86XE3 530 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 COL23A1Q86Y22 540 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RFX6Q8HWS3 928 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 P3H2Q8IVL5 708 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 VPS52Q8N1B4 723 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RTL3Q8N8U3 475 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 KDF1Q8NAX2 398 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 BBOF1Q8ND07 529 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 Q8NFD4 153 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 LINS1Q8NG48 757 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 OR8K3Q8NH51 312 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FIBINQ8TAL6 211 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SYTL5Q8TDW5 730 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC5A11Q8WWX8 675 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RAPGEF5Q92565 580 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 DDX17Q92841 729 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 DHX58Q96C10 678 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 EAF2Q96CJ1 260 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 KLRG1Q96E93 195 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PDLIM5Q96HC4 596 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 APOPT1Q96IL0 206 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SNX27Q96L92 541 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SNX22Q96L94 193 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FAM111AQ96PZ2 611 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PRAM1Q96QH2 718 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RBM15Q96T37 977 aaKnown RBP eCLIP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms