RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
ATG4B-207ENST00000415107 LRMPQ12912 555 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 DUSP4Q13115 394 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-207ENST00000415107 AAK1Q2M2I8 961 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 PPM1LQ5SGD2 360 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 RRAGAQ7L523 313 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-207ENST00000415107 FUKQ8N0W3 1084 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 LEMD2Q8NC56 503 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-207ENST00000415107 STK33Q9BYT3 514 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 GPR88Q9GZN0 384 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
ATG4B-207ENST00000415107 PRRG1O14668 218 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 TRIM66O15016 1216 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 XYLBO75191 536 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 MICAL2O94851 1124 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 LRG1P02750 347 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 VDRP11473 427 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 MTHFRP42898 656 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 ARPP19P56211 112 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 UBASH3AP57075 661 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 JAM2P57087 298 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
ATG4B-207ENST00000415107 IQCEQ6IPM2 695 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 LLGL2Q6P1M3 1020 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 FAM71AQ8IYT1 594 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 ATXN2LQ8WWM7 1075 aaKnown RBP12.66□□□□□ -0.38
ATG4B-207ENST00000415107 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
ATG4B-207ENST00000415107 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.382e-6■■■■■ 96.1
ATG4B-207ENST00000415107 ABI2Q9NYB9 513 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-207ENST00000415107 PCDHB4Q9Y5E5 795 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
ATG4B-207ENST00000415107 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 F8VZ95 297 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 O00370 1275 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 TEX33O43247 280 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 CBFA2T2O43439 604 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 MBTPS2O43462 519 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 RFPL2O75678 378 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 ATF6P18850 670 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 KCNA5P22460 613 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 ALDH1A3P47895 512 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 SKIV2LQ15477 1246 aaKnown RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 CCDC142Q17RM4 750 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 CES5AQ6NT32 575 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 TTC9BQ8N6N2 239 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 SLC2A14Q8TDB8 520 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 PSMG2Q969U7 264 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 CYFIP2Q96F07 1278 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 TRMT2BQ96GJ1 504 aaKnown RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 MYRFLQ96LU7 910 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 RIPOR3Q96MK2 946 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 UBXN6Q9BZV1 441 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 WDR6Q9NNW5 1121 aaKnown RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 AJAP1Q9UKB5 411 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-207ENST00000415107 FAM50BQ9Y247 325 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
ATG4B-207ENST00000415107 CCDC195A0A1B0GUA6 201 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 FAM92AA1XBS5 289 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 RNF225M0QZC1 329 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 EPHB6O15197 1021 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CSH1P0DML2 217 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CSH2P0DML3 217 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 NPR3P17342 541 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 BDNFP23560 247 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CYP2F1P24903 491 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 EPHB3P54753 998 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 BPIFB4P59827 614 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 APBA1Q02410 837 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 TWF1Q12792 350 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 DRAP1Q14919 205 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 VEPH1Q14D04 833 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CNGA2Q16280 664 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms