RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SOCS4Q8WXH5 440 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 SLITRK1Q96PX8 696 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 AGAP1Q9UPQ3 857 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 HTTP42858 3142 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 SMAPO00193 183 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 RNF8O76064 485 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 KRT1P04264 644 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 PCK1P35558 622 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 FLT3P36888 993 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 PNPLA4P41247 253 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
LIMS1-205ENST00000410093 GNGT1P63211 74 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF394Q53GI3 561 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 DENND1BQ6P3S1 775 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 RHBDF2Q6PJF5 856 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 LRRC31Q6UY01 552 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 CATSPER4Q7RTX7 472 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 ZDHHC17Q8IUH5 632 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 TMEM192Q8IY95 271 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 NPLOC4Q8TAT6 608 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 STK32AQ8WU08 396 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 C1orf54Q8WWF1 131 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
LIMS1-205ENST00000410093 MCRS1Q96EZ8 462 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 CPB2Q96IY4 423 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 PHACTR1Q9C0D0 580 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 ASNSD1Q9NWL6 643 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 POLIQ9UNA4 740 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 USTQ9Y2C2 406 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 NEU2Q9Y3R4 380 aa14.31□□□□□ -0.12
LIMS1-205ENST00000410093 HAS3O00219 553 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 O00370 1275 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 GPR32O75388 356 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 MICAL2O94851 1124 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 AGTP01019 485 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 ITGAVP06756 1048 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CCL5P13501 91 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 DARSP14868 501 aaKnown RBP14.3□□□□□ -0.12
LIMS1-205ENST00000410093 PSMA2P25787 234 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
LIMS1-205ENST00000410093 HNRNPH2P55795 449 aaKnown RBP14.3□□□□□ -0.12
LIMS1-205ENST00000410093 PPP2R2AP63151 447 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 MTFR1Q15390 333 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 TAZQ16635 292 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 PTPN20Q4JDL3 420 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 SPOCD1Q6ZMY3 1216 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 PCGF5Q86SE9 256 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 VSIG1Q86XK7 387 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CPNE8Q86YQ8 564 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CENPTQ96BT3 561 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CCDC114Q96M63 670 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 HEXIM2Q96MH2 286 aaKnown RBP14.3□□□□□ -0.12
LIMS1-205ENST00000410093 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CHST7Q9NS84 486 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 ANAPC5Q9UJX4 755 aa14.3□□□□□ -0.12
LIMS1-205ENST00000410093 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
LIMS1-205ENST00000410093 RIPK2O43353 540 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 LIASO43766 372 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 TCEA3O75764 348 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ELNP15502 786 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 CYP3A5P20815 502 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 IVDP26440 423 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ADCY8P40145 1251 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 RGS2P41220 211 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 GPD2P43304 727 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 KCNJ1P48048 391 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF252P-AS1Q0IIN9 211 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 PDCLQ13371 301 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 MFSD10Q14728 455 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ZBTB6Q15916 424 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 C2CD6Q53TS8 623 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ZFYVE27Q5T4F4 411 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 MFSD5Q6N075 450 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 XYLT1Q86Y38 959 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 TLCD1Q96CP7 247 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 SNX27Q96L92 541 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 SDCBP2Q9H190 292 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 PPCSQ9HAB8 311 aa14.29□□□□□ -0.12
LIMS1-205ENST00000410093 KIAA0100Q14667 2235 aaKnown RBP14.29□□□□□ -0.12
LIMS1-205ENST00000410093 hCG_1818297A0A087WSY0 165 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 MEFVO15553 781 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-205ENST00000410093 DYNC1LI2O43237 492 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-205ENST00000410093 INHAP05111 366 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 CYP2C9P11712 490 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 HOXA11P31270 313 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-205ENST00000410093 SCNN1AP37088 669 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 CDKN2BP42772 138 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 PSEN2P49810 448 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms