RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 JAG2Q9Y219 1238 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 CLCA1A8K7I4 914 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 AREL1O15033 823 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 NPC1O15118 1278 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 SRGAP2O75044 1071 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 SKAP2O75563 359 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ERBB2P04626 1255 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ITGB3P05106 788 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PDHA1P08559 390 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PECAM1P16284 738 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 KCNA2P16389 499 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 HOXA5P20719 270 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 NTSR1P30989 418 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ATICP31939 592 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PXNP49023 591 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 RENBPP51606 427 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 MYO1EQ12965 1108 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PDCD2Q16342 344 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PREPLQ4J6C6 727 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 FOXR2Q6PJQ5 311 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 HTR3DQ70Z44 454 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 GAS2L3Q86XJ1 694 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PALM2Q8IXS6 379 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 SDR16C5Q8N3Y7 309 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 CCDC150Q8NCX0 1101 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 DNAJB14Q8TBM8 379 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 FAM89AQ96GI7 184 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZBTB45Q96K62 511 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 TEPSINQ96N21 525 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 RMDN3Q96TC7 470 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 PCDHAC1Q9H158 963 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 DEF6Q9H4E7 631 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 GBA2Q9HCG7 927 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZSCAN32Q9NX65 697 aa4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 DNMT3BQ9UBC3 853 aaKnown RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZMYND8Q9ULU4 1186 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P17-201ENST00000403495 UNC119BA6NIH7 251 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 F5H697 171 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ACKR2O00590 384 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 RGS10O43665 173 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ASNA1O43681 348 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 PIAS2O75928 621 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 USP1O94782 785 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ATXN1LP0C7T5 689 aaKnown RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 GYS1P13807 737 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 HGFP14210 728 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 VEGFAP15692 232 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ITGALP20701 1170 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 KCNA3P22001 575 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZFP36P26651 326 aaKnown RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ADORA2AP29274 412 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 GRK6P43250 576 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NPTX2P47972 431 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NDUFV1P49821 464 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 PRKAG1P54619 331 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 WNT3P56703 355 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 CXADRP78310 365 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 FPGSQ05932 587 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 RAPGEF1Q13905 1077 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 SPARCL1Q14515 664 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TAF5Q15542 800 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TIGD6Q17RP2 521 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMEM95Q3KNT9 176 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 MGAT5BQ3V5L5 792 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZACNQ401N2 412 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 RBM20Q5T481 1227 aaKnown RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 LIN54Q6MZP7 749 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 RGS7BPQ6MZT1 257 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 JMJD6Q6NYC1 403 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TLDC1Q6P9B6 456 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 KIAA0408Q6ZU52 694 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMPRSS9Q7Z410 1059 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 ADGRG5Q8IZF4 528 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 CACNA2D3Q8IZS8 1091 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 CPXCR1Q8N123 301 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMEM132CQ8N3T6 1108 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 IPCEF1Q8WWN9 437 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 PPP2R3CQ969Q6 453 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NELL2Q99435 816 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 SLC46A2Q9BY10 475 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 MYLK2Q9H1R3 596 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 EPS8L2Q9H6S3 715 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 SAGE1Q9NXZ1 904 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 DACT1Q9NYF0 836 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 SERTAD3Q9UJW9 196 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NDRG4Q9ULP0 352 aaKnown RBP4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 SHOC2Q9UQ13 582 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 CDY1Q9Y6F8 540 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 FPGT-TNNI3KV9GXZ4 949 aa4.61□□□□□ -1.67
HMGB1P17-201ENST00000403495 NPHP1O15259 732 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 NDUFA10O95299 355 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 VNN1O95497 513 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 CFIP05156 583 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 CSF1RP07333 972 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 NR4A1P22736 598 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 GATA3P23771 443 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 ANXA11P50995 505 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms