RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GPRC5AQ8NFJ5 357 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ZNF398Q8TD17 642 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 PCDH9Q9HC56 1237 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 NKX1-2Q9UD57 310 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 RPL26L1Q9UNX3 145 aaKnown RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 PTPRJQ12913 1337 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 SMNDC1O75940 238 aaKnown RBP eCLIP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ZWINTO95229 277 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ITGAVP06756 1048 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ETS1P14921 441 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 MMP8P22894 467 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 INHBEP58166 350 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 SLC45A4Q5BKX6 768 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 XRRA1Q6P2D8 792 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 NLRX1Q86UT6 975 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ZBED8Q8IZ13 594 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 SH3TC2Q8TF17 1288 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 STK32AQ8WU08 396 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 TBC1D10AQ9BXI6 508 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 PHACTR1Q9C0D0 580 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 C2CD2LO14523 706 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 TCF4P15884 667 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 NLRP11P59045 1033 aaKnown RBP20.84■□□□□ 0.93
CCDC47-202ENST00000403162 RPL7AP62424 266 aaKnown RBP20.84■□□□□ 0.93
CCDC47-202ENST00000403162 BLMHQ13867 455 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 WASHC2DQ5SRD0 308 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 WDR78Q5VTH9 848 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 IFNL1Q8IU54 200 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 ENDOVQ8N8Q3 282 aaKnown RBP20.84■□□□□ 0.93
CCDC47-202ENST00000403162 ZNF75CPQ92670 426 aaPredicted RBP20.84■□□□□ 0.93
CCDC47-202ENST00000403162 R3HDMLQ9H3Y0 253 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 AGO2Q9UKV8 859 aaKnown RBP20.84■□□□□ 0.93
CCDC47-202ENST00000403162 LRRC42Q9Y546 428 aa20.84■□□□□ 0.93
CCDC47-202ENST00000403162 hCG_1818297A0A087WSY0 165 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 APLP1P51693 650 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 SREBF2Q12772 1141 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 TAF11Q15544 211 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 WDR72Q3MJ13 1102 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 ARHGEF16Q5VV41 709 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 OTOAQ7RTW8 1153 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 KCNN1Q92952 543 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 GPRASP2Q96D09 838 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 MAK16Q9BXY0 300 aaKnown RBP20.83■□□□□ 0.93
CCDC47-202ENST00000403162 TLE6Q9H808 572 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 CREBZFQ9NS37 354 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 IVNS1ABPQ9Y6Y0 642 aa20.83■□□□□ 0.93
CCDC47-202ENST00000403162 A0A1W2PPM1 405 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 HNRNPCL1O60812 293 aaKnown RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 TPBGLP0DKB5 382 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 SSTR3P32745 418 aaPredicted RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 GEMIN4P57678 1058 aaKnown RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 PDIA2Q13087 525 aaKnown RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 CMPK2Q5EBM0 449 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 HP1BP3Q5SSJ5 553 aaPredicted RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 LVRNQ6Q4G3 990 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 LONP2Q86WA8 852 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 NAF1Q96HR8 494 aaKnown RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 ZIC5Q96T25 663 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 POLR3FQ9H1D9 316 aaPredicted RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 SAR1AQ9NR31 198 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 LNPEPQ9UIQ6 1025 aa20.83■□□□□ 0.92
CCDC47-202ENST00000403162 CORO1CQ9ULV4 474 aaPredicted RBP20.83■□□□□ 0.92
CCDC47-202ENST00000403162 TCRBV5S1A1TA0A578 114 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 NEBLO76041 1014 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 FGFR1P11362 822 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 GM2AP17900 193 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 CCNA1P78396 465 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 TAF1CQ15572 869 aaPredicted RBP20.82■□□□□ 0.92
CCDC47-202ENST00000403162 DEFB115Q30KQ5 88 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 TFDP3Q5H9I0 405 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 ZFYVE27Q5T4F4 411 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 FYB2Q5VWT5 728 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 CYP26B1Q9NR63 512 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
CCDC47-202ENST00000403162 KCNG1Q9UIX4 513 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 SIP14410 1827 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 MAFGO15525 162 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 CALB1P05937 261 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 ACOT2P49753 483 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 ZNF132P52740 706 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 GPX6P59796 221 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 NOP14P78316 857 aaKnown RBP20.82■□□□□ 0.92
CCDC47-202ENST00000403162 CAPN12Q6ZSI9 719 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 NLRP9Q7RTR0 991 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 PCGF5Q86SE9 256 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 TEX9Q8N6V9 391 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 KCNV2Q8TDN2 545 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 MAF1Q9H063 256 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 PORCNQ9H237 461 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 RABGEF1Q9UJ41 708 aa20.82■□□□□ 0.92
CCDC47-202ENST00000403162 FARP1Q9Y4F1 1045 aaPredicted RBP20.82■□□□□ 0.92
CCDC47-202ENST00000403162 KIAA1217Q5T5P2 1943 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 CHRM1P11229 460 aaPredicted RBP20.81■□□□□ 0.92
CCDC47-202ENST00000403162 KRT4P19013 534 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 PTPN4P29074 926 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 CCND2P30279 289 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 CDKN2BP42772 138 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 HIF1AQ16665 826 aa20.81■□□□□ 0.92
CCDC47-202ENST00000403162 ZNF449Q6P9G9 518 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms