RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 HARS2P49590 506 aaKnown RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 RARS2Q5T160 578 aaKnown RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PAPD7Q5XG87 772 aaKnown RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 LONP2Q86WA8 852 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 AKT1S1Q96B36 256 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 OSBPL1AQ9BXW6 950 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PABPC3Q9H361 631 aaKnown RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 NSMCE4AQ9NXX6 385 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PRPF4O43172 522 aaKnown RBP eCLIP18.94■□□□□ 0.626e-7■■■■□ 19.8
COL18A1-204ENST00000400337 IL10P22301 178 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 TRPM8Q7Z2W7 1104 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 RNF180Q86T96 592 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 CEP19Q96LK0 163 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PPP1R2P1Q96PQ5 205 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 SLC39A10Q9ULF5 831 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 DEPDC5O75140 1603 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 CSDE1O75534 798 aaKnown RBP18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PRLRP16471 622 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 TGFB2P61812 414 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PTK2BQ14289 1009 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 SPDYAQ5MJ70 313 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 C9orf131Q5VYM1 1079 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 SHCBP1Q8NEM2 672 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 TRIM49D1C9J1S8 452 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 C6orf10Q5SRN2 563 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 CNPY4Q8N129 248 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 SH3BP1Q9Y3L3 701 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 PCDHB7Q9Y5E2 793 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 SLC4A7Q9Y6M7 1214 aa18.94■□□□□ 0.62
COL18A1-204ENST00000400337 MAP4P27816 1152 aaKnown RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 SREBF2Q12772 1141 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 MAPRE1Q15691 268 aaKnown RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 SYTL3Q4VX76 610 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 CCDC33Q8N5R6 958 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 CISHQ9NSE2 258 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 A0A087WZ62 844 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 PMPCBO75439 489 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 TFDP3Q5H9I0 405 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 METTL7BQ6UX53 244 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 RFWD2Q8NHY2 731 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 FDXACB1Q9BRP7 624 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 MANSC1Q9H8J5 431 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 KIAA1257Q9ULG3 409 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 PCDHB8Q9UN66 801 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 C2CD2LO14523 706 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 FCGRTP55899 365 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 RUBCNLQ9H714 662 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 A0A087X0B3 334 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 VCPP55072 806 aaKnown RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 CEP70Q8NHQ1 597 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 E2F7Q96AV8 911 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 MTBPQ96DY7 904 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 SERPINB12Q96P63 405 aa18.93■□□□□ 0.62
COL18A1-204ENST00000400337 FRMD8Q9BZ67 464 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 RIMS1Q86UR5 1692 aaKnown RBP18.93■□□□□ 0.62
COL18A1-204ENST00000400337 NUDT18Q6ZVK8 323 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 ARMC2Q8NEN0 867 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 FAM129AQ9BZQ8 928 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 SPATC1LQ9H0A9 340 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 KIAA1683Q9H0B3 1180 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 SLITRK3O94933 977 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 VIL1P09327 827 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 RARRES1P49788 294 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 DENND5BQ6ZUT9 1274 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 WDR49Q8IV35 697 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 SUPT3HB4E1H0 165 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 CYB561D2O14569 222 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 SUPT3HO75486 399 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 ALDH1A3P47895 512 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 SARSP49591 514 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 ABCE1P61221 599 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 LAMTOR4Q0VGL1 99 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 CHI3L2Q15782 390 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 WDR93Q6P2C0 686 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 NUP93Q8N1F7 819 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 EPS8L3Q8TE67 593 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 FAM172AQ8WUF8 416 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 LZICQ8WZA0 190 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 KDM4CQ9H3R0 1056 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 DSG3P32926 999 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 OTUD4Q01804 1114 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 DNAL1Q4LDG9 190 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 TMEM106CQ9BVX2 250 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 MRPL1Q9BYD6 325 aaKnown RBP18.92■□□□□ 0.62
COL18A1-204ENST00000400337 ZNF518BQ9C0D4 1074 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 YIPF3Q9GZM5 350 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 COG4Q9H9E3 785 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 PKP3Q9Y446 797 aa18.92■□□□□ 0.62
COL18A1-204ENST00000400337 GPR182O15218 404 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 DNAJC3Q13217 504 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 PTGISQ16647 500 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 PTRHD1Q6GMV3 140 aaKnown RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 AGGF1Q8N302 714 aaeCLIP18.91■□□□□ 0.625e-8■■■■■ 75.9
COL18A1-204ENST00000400337 GPBP1L1Q9HC44 474 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms