RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRIM48Q8IWZ4 208 aa8.9□□□□□ -0.99
CACNA1C-220ENST00000399655 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.99
CACNA1C-220ENST00000399655 PIGBOS1A0A0B4J2F0 54 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CCDC154A6NI56 674 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PPM1BO75688 479 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 TKTP29401 623 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GTF2IP78347 998 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 RCOR2Q8IZ40 523 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF75CPQ92670 426 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GIMAP5Q96F15 307 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 RGS14O43566 566 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ENO3P13929 434 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 DPYSQ14117 519 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GRB14Q14449 540 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PAPD7Q5XG87 772 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SRFBP1Q8NEF9 429 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ARPP21Q9UBL0 812 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PKP3Q9Y446 797 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 FAM135AQ9P2D6 1515 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 DHTKD1Q96HY7 919 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SPASTQ9UBP0 616 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 AP3M1Q9Y2T2 418 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 MAP3K2Q9Y2U5 619 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 STARD13Q9Y3M8 1113 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GRIP1Q9Y3R0 1128 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PPEF2O14830 753 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 TCEA3O75764 348 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ATG7O95352 703 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 BPNT1O95861 308 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CEBPGP53567 150 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 POLR2FP61218 127 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 UBE3CQ15386 1083 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 KBTBD8Q8NFY9 601 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 HPS3Q969F9 1004 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 MYBL1P10243 752 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CACNA2D1P54289 1103 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CIR1Q86X95 450 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GALNT4Q8N4A0 578 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ATP8A2Q9NTI2 1148 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 MCM8Q9UJA3 840 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 M0R129 80 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PMPCBO75439 489 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ADARP55265 1226 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 GIT2Q14161 759 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ARHGEF19Q8IW93 802 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CMA1P23946 247 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 PHACTR4Q8IZ21 702 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SRBD1Q8N5C6 995 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 INO80EQ8NBZ0 244 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 TBC1D24Q9ULP9 559 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 HSD17B4P51659 736 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 HSDL1Q3SXM5 330 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SMAD5Q99717 465 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 NLNQ9BYT8 704 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 COPS7BQ9H9Q2 264 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 WDR41Q9HAD4 459 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SNX14Q9Y5W7 946 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ENO2P09104 434 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SPTBP11277 2137 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF248Q8NDW4 579 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 KCNK1O00180 336 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 IFNA6P05013 189 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 CDH11P55287 796 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 OR4C6Q8NH72 309 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 SMURF2Q9HAU4 748 aa8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 MAGED2Q9UNF1 606 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-220ENST00000399655 C1orf232A0A0U1RR37 186 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 GPC3P51654 580 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 EIF4A1P60842 406 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 AMPD2Q01433 879 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TFCP2Q12800 502 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SMYD1Q8NB12 490 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 FAR1Q8WVX9 515 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 PTPRN2Q92932 1015 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SEC31BQ9NQW1 1179 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 NSD2O96028 1365 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 OMPP47874 163 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MAGOHP61326 146 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CDKL1Q00532 357 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 Q4G0T1 1027 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 PRPF39Q86UA1 669 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TAB3Q8N5C8 712 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 LPCAT1Q8NF37 534 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MIPEPQ99797 713 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SYT4Q9H2B2 425 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TFAMQ00059 246 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TBRG1Q3YBR2 411 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 DSCC1Q9BVC3 393 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ABCC12Q96J65 1359 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ATP9BO43861 1147 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 PHF2O75151 1096 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 XKR9Q5GH70 373 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ATG16L2Q8NAA4 619 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TTYH1Q9H313 450 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MARCH7Q9H992 704 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms