RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ELMO3Q96BJ8 720 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 ERGIC2Q96RQ1 377 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 CRACR2AQ9BSW2 395 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 ANP32EQ9BTT0 268 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 VPS16Q9H269 839 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 CRISPLD1Q9H336 500 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 DPEP3Q9H4B8 488 aa18.8■□□□□ 0.6
CTNS-203ENST00000399306 WDR6Q9NNW5 1121 aaKnown RBP18.8■□□□□ 0.6
CTNS-203ENST00000399306 ABI2Q9NYB9 513 aaPredicted RBP18.8■□□□□ 0.6
CTNS-203ENST00000399306 PES1O00541 588 aaKnown RBP18.79■□□□□ 0.6
CTNS-203ENST00000399306 MICAL2O94851 1124 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 FGF19O95750 216 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 PTPN2P17706 415 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 ACO1P21399 889 aaKnown RBP18.79■□□□□ 0.6
CTNS-203ENST00000399306 EPHA5P54756 1037 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 TFF2Q03403 129 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 TWF1Q12792 350 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 LRMPQ12912 555 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 FILIP1LQ4L180 1135 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 IQCEQ6IPM2 695 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 ACOT1Q86TX2 421 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 ARHGEF19Q8IW93 802 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 SPATA17Q96L03 361 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 ZNF512Q96ME7 567 aaPredicted RBP18.79■□□□□ 0.6
CTNS-203ENST00000399306 HNRNPABQ99729 332 aaKnown RBP18.79■□□□□ 0.6
CTNS-203ENST00000399306 ARID3AQ99856 593 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 PIDD1Q9HB75 910 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.63e-13■■■■■ 511.3
CTNS-203ENST00000399306 CEP72Q9P209 647 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
CTNS-203ENST00000399306 TRIM66O15016 1216 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 BMP1P13497 986 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 ATP1A3P13637 1013 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 CD58P19256 250 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 RAD23BP54727 409 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 KCNMA1Q12791 1236 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 VEPH1Q14D04 833 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 STILQ15468 1287 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 MGAT5BQ3V5L5 792 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 ARHGAP17Q68EM7 881 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 DPY19L2P1Q6NXN4 242 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 LUZP1Q86V48 1076 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 SLC4A11Q8NBS3 891 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 PSMG2Q969U7 264 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 C8orf48Q96LL4 319 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 TWNKQ96RR1 684 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 PHF7Q9BWX1 381 aaPredicted RBP18.78■□□□□ 0.6
CTNS-203ENST00000399306 B3GNT5Q9BYG0 378 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 SIX2Q9NPC8 291 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 UBE2TQ9NPD8 197 aaPredicted RBP18.78■□□□□ 0.6
CTNS-203ENST00000399306 EHD2Q9NZN4 543 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 HMGXB4Q9UGU5 601 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 NOTCH4Q99466 2003 aa18.78■□□□□ 0.6
CTNS-203ENST00000399306 NCOR1O75376 2440 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 ZNF197O14709 1029 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CSH1P0DML2 217 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CSH2P0DML3 217 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CYP2F1P24903 491 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 ZNF132P52740 706 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CYP27A1Q02318 531 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CLUL1Q15846 466 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 TJAP1Q5JTD0 557 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 FAM35AQ86V20 835 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 FUKQ8N0W3 1084 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 TTC9BQ8N6N2 239 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 SHC3Q92529 594 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 SMARCD1Q96GM5 515 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 SEPT5Q99719 369 aaPredicted RBP18.77■□□□□ 0.6
CTNS-203ENST00000399306 CSNK1G1Q9HCP0 422 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.6
CTNS-203ENST00000399306 ZFP37Q9Y6Q3 630 aaPredicted RBP18.77■□□□□ 0.6
CTNS-203ENST00000399306 DOCK6Q96HP0 2047 aa18.77■□□□□ 0.6
CTNS-203ENST00000399306 CLUHO75153 1309 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 MYH10P35580 1976 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 A0A1B0GTH6 734 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 CCL16O15467 120 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 VDRP11473 427 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 ATF6P18850 670 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 MEA1Q16626 185 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 KLHDC7AQ5VTJ3 777 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 PAQR9Q6ZVX9 377 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 RRAGAQ7L523 313 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 CYFIP2Q96F07 1278 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 TRMT2BQ96GJ1 504 aaKnown RBP18.76■□□□□ 0.59
CTNS-203ENST00000399306 PNPLA8Q9NP80 782 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 PCDHB4Q9Y5E5 795 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 GREB1Q4ZG55 1949 aa18.76■□□□□ 0.59
CTNS-203ENST00000399306 A0A1W2PQC6 194 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 NOL4O94818 638 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 UCHL3P15374 230 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 BDNFP23560 247 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 UBXN1Q04323 297 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 PABPC1LQ4VXU2 614 aaKnown RBP18.75■□□□□ 0.59
CTNS-203ENST00000399306 TMEM270Q6UE05 265 aa18.75■□□□□ 0.59
CTNS-203ENST00000399306 DNAJB7Q7Z6W7 309 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms