RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 DHX58Q96C10 678 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 TRMT2BQ96GJ1 504 aaKnown RBP15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 FUBP3Q96I24 572 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 PKMYT1Q99640 499 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 TRIM9Q9C026 710 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 KIAA1586Q9HCI6 787 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 HSPBP1Q9NZL4 362 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 GTF3C4Q9UKN8 822 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 CCL26Q9Y258 94 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 DENND4CQ5VZ89 1909 aa15.32■□□□□ 0.04
SNRNP25-203ENST00000397876 K7ESF4 209 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 GABRDO14764 452 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 EIF3DO15371 548 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 YEATS4O95619 227 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 CNR2P34972 360 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 AMPD2Q01433 879 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 RUNX3Q13761 415 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 SIM2Q14190 667 aaPredicted RBP15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 ZNF268Q14587 947 aaPredicted RBP15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 E2F4Q16254 413 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 SOWAHAQ2M3V2 549 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 DPH6Q7L8W6 267 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 CBWD2Q8IUF1 395 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 WDR49Q8IV35 697 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 SCN4BQ8IWT1 228 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 GLIS3Q8NEA6 775 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 HPS3Q969F9 1004 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 EBF3Q9H4W6 596 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 TRPC7Q9HCX4 862 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 HPS4Q9NQG7 708 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 CDV3Q9UKY7 258 aaKnown RBP15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
SNRNP25-203ENST00000397876 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 CUTAO60888 179 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 TADA3O75528 432 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 UBE4BO95155 1302 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 RETP07949 1114 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 DMWDQ09019 674 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 GRSF1Q12849 480 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 ZNF638Q14966 1978 aaKnown RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 MAPRE1Q15691 268 aaKnown RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 CCDC142Q17RM4 750 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 MAGEF1Q9HAY2 307 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
SNRNP25-203ENST00000397876 TRAV19A0A0A6YYK7 116 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 HCRTO43612 131 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 LRP3O75074 770 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 CKMP06732 381 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 HOXA6P31267 233 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 MAGEA11P43364 429 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 PSMC1P62191 440 aaKnown RBP15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 SPEM2Q0P670 501 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 MTF1Q14872 753 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 TMEM196Q5HYL7 178 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 CPA6Q8N4T0 437 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 FSIP1Q8NA03 581 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 KBTBD7Q8WVZ9 684 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 MYLPFQ96A32 169 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 PARD6AQ9NPB6 346 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 AGPAT3Q9NRZ7 376 aa15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
SNRNP25-203ENST00000397876 TRDMT1O14717 391 aaKnown RBP15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 HRO43593 1189 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 ATG13O75143 517 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 ARSAP15289 507 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 TGM1P22735 817 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 HOXD13P35453 343 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 USP4Q13107 963 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 SRSF5Q13243 272 aaKnown RBP15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 KCNB1Q14721 858 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 FSTL4Q6MZW2 842 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 SHC4Q6S5L8 630 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 VSTM1Q6UX27 236 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 CEP68Q76N32 757 aa15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 EPM2AIP1Q7L775 607 aaPredicted RBP15.28■□□□□ 0.04
SNRNP25-203ENST00000397876 HS2ST1Q7LGA3 356 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms