RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
CAST-206ENST00000395812 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
CAST-206ENST00000395812 TEX33O43247 280 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 MT-ND3P03897 115 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 TAC1P20366 129 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 CDC25CP30307 473 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 SMARCB1Q12824 385 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 HECTD3Q5T447 861 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 ABHD15Q6UXT9 468 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 DHX40Q8IX18 779 aaKnown RBP13.44□□□□□ -0.26
CAST-206ENST00000395812 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 EXT2Q93063 718 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 ZBTB9Q96C00 473 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 POP1Q99575 1024 aaKnown RBP13.44□□□□□ -0.26
CAST-206ENST00000395812 CDT1Q9H211 546 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAST-206ENST00000395812 ZW10O43264 779 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
CAST-206ENST00000395812 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 MAP4P27816 1152 aaKnown RBP13.44□□□□□ -0.26
CAST-206ENST00000395812 CHKAP35790 457 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 NSUN2Q08J23 767 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAST-206ENST00000395812 SGCGQ13326 291 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 TSPAN18Q96SJ8 248 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 CFAP69A5D8W1 941 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 F5H423 210 aaPredicted RBP13.44□□□□□ -0.26
CAST-206ENST00000395812 ATP9BO43861 1147 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 KRT37O76014 449 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 FGF19O95750 216 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 RHOAP61586 193 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 EVX2Q03828 476 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 GRB14Q14449 540 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 HACD3Q9P035 362 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 PKP3Q9Y446 797 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
CAST-206ENST00000395812 LUC7L3O95232 432 aaKnown RBP13.43□□□□□ -0.26
CAST-206ENST00000395812 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 TTC19Q6DKK2 380 aaPredicted RBP13.43□□□□□ -0.26
CAST-206ENST00000395812 GTF3C4Q9UKN8 822 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
CAST-206ENST00000395812 ZBTB39O15060 712 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 NDUFS2O75306 463 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 CEP85LQ5SZL2 805 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 KLHDC7AQ5VTJ3 777 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 FEZF2Q8TBJ5 459 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 DRC3Q9H069 523 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 AKAP7Q9P0M2 348 aaPredicted RBP13.43□□□□□ -0.26
CAST-206ENST00000395812 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 DYNC1I1O14576 645 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 STX7O15400 261 aaKnown RBP13.43□□□□□ -0.26
CAST-206ENST00000395812 PSMD6Q15008 389 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 NUGGCQ68CJ6 796 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 RAPGEF5Q92565 580 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 KRT35Q92764 455 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 KIF2CQ99661 725 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 DNM1LO00429 736 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 ESRRBO95718 433 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 VCLP18206 1134 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 RAP1GAPP47736 663 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 STX1BP61266 288 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 CCDC62Q6P9F0 684 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 AP1M1Q9BXS5 423 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 C2CD2Q9Y426 696 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 LTBP4Q8N2S1 1624 aa13.43□□□□□ -0.26
CAST-206ENST00000395812 SSU72P8A0A1W2PR75 194 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 CBX4O00257 560 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
CAST-206ENST00000395812 GALCP54803 685 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 ITGB3BPQ13352 177 aaPredicted RBP13.42□□□□□ -0.26
CAST-206ENST00000395812 SLC18A3Q16572 532 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 CNKSR3Q6P9H4 555 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 ADCK2Q7Z695 626 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
CAST-206ENST00000395812 SLC2A14Q8TDB8 520 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 CDH9Q9ULB4 789 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 RNF40O75150 1001 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 NDUFS3O75489 264 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 KRT38O76015 456 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 ARF4P18085 180 aaPredicted RBP13.42□□□□□ -0.26
CAST-206ENST00000395812 GRM5P41594 1212 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 TTC31Q49AM3 519 aaPredicted RBP13.42□□□□□ -0.26
CAST-206ENST00000395812 TRIM65Q6PJ69 517 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 UNC93AQ86WB7 457 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 TRIM42Q8IWZ5 723 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 KRT222Q8N1A0 295 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 ZNF507Q8TCN5 953 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 MGARPQ8TDB4 240 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 TXNRD2Q9NNW7 524 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 LATS2Q9NRM7 1088 aa13.42□□□□□ -0.26
CAST-206ENST00000395812 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms