RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CASP8AP2Q9UKL3 1982 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 FAM155BO75949 473 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 ETS1P14921 441 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 LRRC14Q15048 493 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 TAF5Q15542 800 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 ZRSR2Q15696 482 aaKnown RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 C11orf70Q9BRQ4 267 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 C1orf112Q9NSG2 853 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 CHD5Q8TDI0 1954 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 SLC25A27O95847 323 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 ITGA8P53708 1063 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 EIF3BP55884 814 aaKnown RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 CMASQ8NFW8 434 aaPredicted RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 TSPAN1O60635 241 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 RASSF9O75901 435 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 MAPK4P31152 587 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 CETN1Q12798 172 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 CCDC38Q502W7 563 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 POLNQ7Z5Q5 900 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ARHGEF2Q92974 986 aaKnown RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 FAM118BQ9BPY3 351 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 NIF3L1Q9GZT8 377 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SMYD3Q9H7B4 428 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 TTC4O95801 387 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 PRKCBP05771 671 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 CXCL8P10145 99 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 EFNA5P52803 228 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 NAT8LQ8N9F0 302 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 PPTC7Q8NI37 304 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 PRCCQ92733 491 aaPredicted RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 USP6NLQ92738 828 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 MRPL4Q9BYD3 311 aaKnown RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SLC12A4Q9UP95 1085 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 COL1A2P08123 1366 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 MYO16Q9Y6X6 1858 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 LRRIQ4A6NIV6 560 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ZSCAN5DPP0CG00 497 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ITIH2P19823 946 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 RFC1P35251 1148 aaPredicted RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 VPS41P49754 854 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 PSEN1P49768 467 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 AP3M2P53677 418 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SETDB1Q15047 1291 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 SH3PXD2AQ5TCZ1 1133 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ANKRD35Q8N283 1001 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ZCCHC9Q8N567 271 aaKnown RBP10.81□□□□□ -0.68
HIF1A-203ENST00000394997 GDAP1Q8TB36 358 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 DPF3Q92784 378 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 FAF2Q96CS3 445 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 TSC22D3Q99576 134 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 ZNF518BQ9C0D4 1074 aa10.81□□□□□ -0.68
HIF1A-203ENST00000394997 TCRBV7S3A2A0A539 114 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 SIGLEC16A6NMB1 481 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 LACTBL1A8MY62 500 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 ITGAVP06756 1048 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 GRB14Q14449 540 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 MXD4Q14582 209 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 MUM1Q2TAK8 710 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 JADE1Q6IE81 842 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 SLC7A3Q8WY07 619 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 RTP4Q96DX8 246 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 MTRF1LQ9UGC7 380 aaKnown RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 TANC1Q9C0D5 1861 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 PPEF2O14830 753 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 UPP2O95045 317 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 GH1P01241 217 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 LGALS2P05162 132 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 ABHD2P08910 425 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 KRT10P13645 584 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 ARF4P18085 180 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 IGFBP6P24592 240 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 SCTRP47872 440 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 SLC26A2P50443 739 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 CLCN3P51790 818 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 NFX1Q12986 1120 aaKnown RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 PRKG1Q13976 671 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 CRYMQ14894 314 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 RASA2Q15283 850 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 SPOCD1Q6ZMY3 1216 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 TRMT10CQ7L0Y3 403 aaKnown RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 TDRPQ86YL5 185 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 RUNDC3BQ96NL0 473 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 OSBPL8Q9BZF1 889 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 AZI2Q9H6S1 392 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms