RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 SEC16BQ96JE7 1060 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 FRMD8P1Q9BZ68 369 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 H3BRB1 525 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 MICAL2O94851 1124 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 SNAI1O95863 264 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ABHD2P08910 425 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TMEM132DQ14C87 1099 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 PRUNE1Q86TP1 453 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ARHGEF2Q92974 986 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 HPDLQ96IR7 371 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TUT1Q9H6E5 874 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 MORF4L1Q9UBU8 362 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 LGALS13Q9UHV8 139 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 PLXNB2O15031 1838 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 PDHXO00330 501 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 NDC80O14777 642 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TSPAN1O60635 241 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ERBB2P04626 1255 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 IL1R2P27930 398 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ARSEP51690 589 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 STAT4Q14765 748 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TMEM130Q8N3G9 435 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TTC39CQ8N584 583 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 OTUD6BQ8N6M0 293 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 RBM15Q96T37 977 aaKnown RBP eCLIP16.14■□□□□ 0.172e-7■■■□□ 16.3
UBE2D3-207ENST00000394801 DNAJC17Q9NVM6 304 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 KIAA1257Q9ULG3 409 aa16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 TPX2Q9ULW0 747 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 BARX2Q9UMQ3 279 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-207ENST00000394801 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 MAGEA4P43358 317 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 RBP5P82980 135 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 MORF4L2Q15014 288 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 MARCH8Q5T0T0 291 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 GKAP1Q5VSY0 366 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 BBS12Q6ZW61 710 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 TTC13Q8NBP0 860 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 ACAP3Q96P50 834 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 CCDC77Q9BR77 488 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 SYT17Q9BSW7 474 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 PCDH9Q9HC56 1237 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 EURLQ9NYK6 297 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 AGAP1Q9UPQ3 857 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 ZSCAN5DPP0CG00 497 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 CETPP11597 493 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 KDELR1P24390 212 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 IFT88Q13099 833 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 CACNA2D3Q8IZS8 1091 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 MICALL1Q8N3F8 863 aa16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 CMASQ8NFW8 434 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-207ENST00000394801 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 CDH16O75309 829 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 ORC1Q13415 861 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 DUSP28Q4G0W2 176 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 CCDC38Q502W7 563 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 C9orf72Q96LT7 481 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 PPP1R16BQ96T49 567 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 SYNCQ9H7C4 482 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 GEMIN8Q9NWZ8 242 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 ETS1P14921 441 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 GRM5P41594 1212 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 GPS1Q13098 491 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 GRIK4Q16099 956 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 RNASEH2BQ5TBB1 312 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 VSTM1Q6UX27 236 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 PIGWQ7Z7B1 504 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 CABS1Q96KC9 395 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 TTC25Q96NG3 672 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 PRMT1Q99873 361 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 ADPGKQ9BRR6 497 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 SHOC2Q9UQ13 582 aa16.12■□□□□ 0.17
UBE2D3-207ENST00000394801 M0QYV0 167 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 FSBPO95073 299 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 PCK1P35558 622 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 LIG3P49916 1009 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 MYO1EQ12965 1108 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 LCLAT1Q6UWP7 414 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 RIBC1Q8N443 379 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 EMC1Q8N766 993 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 CFAP57Q96MR6 1250 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 TMEM121Q9BTD3 319 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 ZWILCHQ9H900 591 aa16.11■□□□□ 0.17
UBE2D3-207ENST00000394801 NAALADL1Q9UQQ1 740 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms