RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TFAP2BQ92481 460 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 FHDC1Q9C0D6 1143 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 XYLT2Q9H1B5 865 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 PTPRHQ9HD43 1115 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 IGKV6-21A0A0C4DH24 114 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 LIASO43766 372 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 AHCYL1O43865 530 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ARIH2O95376 493 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ZC3H12AQ5D1E8 599 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 HHATQ5VTY9 493 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 CYP4F22Q6NT55 531 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 APOBEC3FQ8IUX4 373 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 SNRNP27Q8WVK2 155 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ACO2Q99798 780 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 MRPL47Q9HD33 250 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 PARVAQ9NVD7 372 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 LNPEPQ9UIQ6 1025 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 F8VP50 259 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 THAP12O43422 761 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 HOXC6P09630 235 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.21
PTBP1-204ENST00000394601 CAV1Q03135 178 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 NFX1Q12986 1120 aaKnown RBP16.33■□□□□ 0.21
PTBP1-204ENST00000394601 ITIH4Q14624 930 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 WDR72Q3MJ13 1102 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
PTBP1-204ENST00000394601 WDR49Q8IV35 697 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 GRK7Q8WTQ7 553 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 CPSF3Q9UKF6 684 aaKnown RBP16.33■□□□□ 0.21
PTBP1-204ENST00000394601 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.21
PTBP1-204ENST00000394601 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.2
PTBP1-204ENST00000394601 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 RNF8O76064 485 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 FESP07332 822 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 KRT10P13645 584 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 ASPAP45381 313 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 MYL6P60660 151 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 TAB3Q8N5C8 712 aaPredicted RBP16.33■□□□□ 0.2
PTBP1-204ENST00000394601 SCOCQ9UIL1 159 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.2
PTBP1-204ENST00000394601 CNMDO75829 334 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 ATF2P15336 505 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 PTPN7P35236 360 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 MCL1Q07820 350 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 LIN9Q5TKA1 542 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 MFSD7Q6UXD7 560 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 MYLK2Q9H1R3 596 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 VCXQ9H320 206 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 CYTH4Q9UIA0 394 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 ANAPC5Q9UJX4 755 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 BAG2O95816 211 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 GSTA1P08263 222 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 GM2AP17900 193 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 OASLQ15646 514 aaKnown RBP16.32■□□□□ 0.2
PTBP1-204ENST00000394601 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-204ENST00000394601 GGA3Q9NZ52 723 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 ARL2BPQ9Y2Y0 163 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-204ENST00000394601 SP100P23497 879 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-204ENST00000394601 ADCY8P40145 1251 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 CPA2P48052 419 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 CGB2Q6NT52 195 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
PTBP1-204ENST00000394601 MCM3APO60318 1980 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 TOM1L1O75674 476 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 GAS8O95995 478 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 GJC1P36383 396 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-204ENST00000394601 STAT5BP51692 787 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 RIPK1Q13546 671 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 VGLL4Q14135 290 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 LY6KQ17RY6 165 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 KIAA0319LQ8IZA0 1049 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 ZCCHC9Q8N567 271 aaKnown RBP16.31■□□□□ 0.2
PTBP1-204ENST00000394601 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 CXorf38Q8TB03 319 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 LRRC8CQ8TDW0 803 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 MAML1Q92585 1016 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 CISHQ9NSE2 258 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 PCDHGC3Q9UN70 934 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 PFDN1O60925 122 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 ZSCAN5DPP0CG00 497 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 ETS1P14921 441 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-204ENST00000394601 CFAP157Q5JU67 520 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 LRRC38Q5VT99 294 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms