RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 RBM23Q86U06 439 aaKnown RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 CHSY1Q86X52 802 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 GPRASP2Q96D09 838 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 GBP5Q96PP8 586 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 GPRC5DQ9NZD1 345 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 IL1RAPL1Q9NZN1 696 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 ZFATQ9P243 1243 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 FAM208AQ9UK61 1670 aaKnown RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 CITO14578 2027 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 SUPT3HB4E1H0 165 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 SPECC1L-ADORA2AF8WAN1 911 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 USP12O75317 370 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 SUPT3HO75486 399 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 FAM153BP0C7A2 387 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 GFAPP14136 432 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 PTK7Q13308 1070 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 CUL3Q13618 768 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 TFDP2Q14188 446 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 FAM153CQ494X1 144 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 FUT11Q495W5 492 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH11-202ENST00000394156 EMBQ6PCB8 327 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 LVRNQ6Q4G3 990 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH11-202ENST00000394156 EPAS1Q99814 870 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 ACSS2Q9NR19 701 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 CTNNAL1Q9UBT7 734 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 FAM153AQ9UHL3 310 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 PCDHB2Q9Y5E7 798 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 CAND2O75155 1236 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 COILP38432 576 aaPredicted RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 USP10Q14694 798 aaKnown RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 TRAPPC11Q7Z392 1133 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 GBP7Q8N8V2 638 aaPredicted RBP9.52□□□□□ -0.89
CDH11-202ENST00000394156 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
CDH11-202ENST00000394156 MYL4P12829 197 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 NAMPTP43490 491 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 ATP13A4Q4VNC1 1196 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 MIPOL1Q8TD10 442 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 CCHCR1Q8TD31 782 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 USP18Q9UMW8 372 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 TRIM66O15016 1216 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 EGFRP00533 1210 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 TAF6P49848 677 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 ORC2Q13416 577 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 C1orf146Q5VVC0 180 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PTPRN2Q92932 1015 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 COG4Q9H9E3 785 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 BAG5Q9UL15 447 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 SLC39A10Q9ULF5 831 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 MEFVO15553 781 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 KRT37O76014 449 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PHLDB3Q6NSJ2 640 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 GPC2Q8N158 579 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 DACT3Q96B18 629 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 IL17RAQ96F46 866 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 MTA3Q9BTC8 594 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PRMT7Q9NVM4 692 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 ADRB2P07550 413 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 MAGEA4P43358 317 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PIGHQ14442 188 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 TAF11Q15544 211 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 BZW1Q7L1Q6 419 aaKnown RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 ULK4Q96C45 1275 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 PNMA8BQ9ULN7 279 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 AXIN1O15169 862 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 SMIM24O75264 130 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 THP07101 528 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 NFICP08651 508 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 KRT4P19013 534 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 HSD17B4P51659 736 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 CCNI2Q6ZMN8 369 aaPredicted RBP9.51□□□□□ -0.89
CDH11-202ENST00000394156 SPOCD1Q6ZMY3 1216 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 ARMC2Q8NEN0 867 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 RXFP2Q8WXD0 754 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 FBXO32Q969P5 355 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 VCXQ9H320 206 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 ANKEF1Q9NU02 776 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 RNF14Q9UBS8 474 aa9.51□□□□□ -0.89
CDH11-202ENST00000394156 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
CDH11-202ENST00000394156 IL18RAPO95256 599 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 GUCY2CP25092 1073 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 HSD17B3P37058 310 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 OTUD4Q01804 1114 aaKnown RBP9.5□□□□□ -0.89
CDH11-202ENST00000394156 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 CXorf38Q8TB03 319 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 TSPAN16Q9UKR8 245 aa9.5□□□□□ -0.89
CDH11-202ENST00000394156 APOBEC2Q9Y235 224 aaKnown RBP9.5□□□□□ -0.89
CDH11-202ENST00000394156 SALL1Q9NSC2 1324 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms