RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 FAM163BP0C2L3 166 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 MAGEA11P43364 429 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 LHX1P48742 406 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
CTSC-202ENST00000393301 MYL7Q01449 175 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 EHHADHQ08426 723 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 SURF1Q15526 300 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 TMEM196Q5HYL7 178 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 FAM171BQ6P995 826 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
CTSC-202ENST00000393301 DGLUCYQ7Z3D6 616 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 MON1AQ86VX9 555 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 LONP2Q86WA8 852 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 CCDC65Q8IXS2 484 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 GPD1LQ8N335 351 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 ENGASEQ8NFI3 743 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 SAAL1Q96ER3 474 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 CCDC34Q96HJ3 373 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 TRIM9Q9C026 710 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 HPS4Q9NQG7 708 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 THG1LQ9NWX6 298 aaKnown RBP13.26□□□□□ -0.29
CTSC-202ENST00000393301 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
CTSC-202ENST00000393301 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 UXTQ9UBK9 157 aaPredicted RBP13.26□□□□□ -0.29
CTSC-202ENST00000393301 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
CTSC-202ENST00000393301 CACNA1BQ00975 2339 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 UBE4BO95155 1302 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 TRDMT1O14717 391 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 HUS1O60921 280 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 RETP07949 1114 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 PFKFB1P16118 471 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 PFKLP17858 780 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 PCSK1P29120 753 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 HOXD13P35453 343 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 SOX9P48436 509 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 KPNA1P52294 538 aaPredicted RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 SNRPFP62306 86 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 RBP5P82980 135 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 USP4Q13107 963 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 Q6ZS52 159 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 STXBP4Q6ZWJ1 553 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 WDR5BQ86VZ2 330 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 FMR1NBQ8N0W7 255 aaPredicted RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 TMEM174Q8WUU8 243 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 TDP1Q9NUW8 608 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 INTS13Q9NVM9 706 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
CTSC-202ENST00000393301 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 LAMA1P25391 3075 aa13.25□□□□□ -0.29
CTSC-202ENST00000393301 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 ATG2BQ96BY7 2078 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 KMT2BQ9UMN6 2715 aaPredicted RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 CHURC1-FNTBB4DL54 471 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 POLR2DO15514 142 aaKnown RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 FOXD2O60548 495 aaPredicted RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 IDEP14735 1019 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 AVPR1AP37288 418 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 FAM160A1Q05DH4 1040 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 RUNX3Q13761 415 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 RSPO4Q2I0M5 234 aaPredicted RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 SOWAHAQ2M3V2 549 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 VSTM1Q6UX27 236 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 ADGRF2Q8IZF7 708 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 RIN3Q8TB24 985 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 ZNF507Q8TCN5 953 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 MRPS31Q92665 395 aaKnown RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 ZFYVE19Q96K21 471 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 SPATA17Q96L03 361 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 MTMR12Q9C0I1 747 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 PDE11AQ9HCR9 933 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 PARD6AQ9NPB6 346 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
CTSC-202ENST00000393301 TBC1D7Q9P0N9 293 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
CTSC-202ENST00000393301 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 MED19A0JLT2 244 aaPredicted RBP13.23□□□□□ -0.29
CTSC-202ENST00000393301 ZNF233A6NK53 670 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
CTSC-202ENST00000393301 PRPF6O94906 941 aaKnown RBP13.23□□□□□ -0.29
CTSC-202ENST00000393301 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 WARSP23381 471 aaKnown RBP13.23□□□□□ -0.29
CTSC-202ENST00000393301 SYKP43405 635 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 UBE2HP62256 183 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 TNK2Q07912 1038 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms