RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GDF6Q6KF10 455 aaPredicted RBP20.02■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF280DQ6N043 979 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF662Q6ZS27 426 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 MTMR12Q9C0I1 747 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 CXCL16Q9H2A7 254 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 AGAP1Q9UPQ3 857 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 CASP8AP2Q9UKL3 1982 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 SCN10AQ9Y5Y9 1956 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 A8MUI8 341 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF185O15231 689 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 GSTA2P09210 222 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 STAG3L1P0CL83 205 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 ENPEPQ07075 957 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 SPA17Q15506 151 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 CCSAPQ6IQ19 270 aaPredicted RBP20.02■□□□□ 0.8
CCDC50-202ENST00000392456 CPLX4Q7Z7G2 160 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 MREGQ8N565 214 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 WHAMMQ8TF30 809 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 NCSTNQ92542 709 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 PACSIN1Q9BY11 444 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 APOBEC3GQ9HC16 384 aaKnown RBP20.02■□□□□ 0.8
CCDC50-202ENST00000392456 CALCAP01258 141 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 HMGCRP04035 888 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 HDAC4P56524 1084 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 SLC18A3Q16572 532 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 KLHDC9Q8NEP7 349 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 PPP1R14BQ96C90 147 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 SPC25Q9HBM1 224 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 TMBIM4Q9HC24 238 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 LNPEPQ9UIQ6 1025 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 SALL4Q9UJQ4 1053 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 SLC4A7Q9Y6M7 1214 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 GOLGA6L10A0A0M3HER8 536 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 DARSP14868 501 aaKnown RBP20.01■□□□□ 0.79
CCDC50-202ENST00000392456 ITIH3Q06033 890 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 CEP128Q6ZU80 1094 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 GCOM2Q9BZD3 368 aaPredicted RBP20.01■□□□□ 0.79
CCDC50-202ENST00000392456 UMODL1Q5DID0 1318 aa20.01■□□□□ 0.79
CCDC50-202ENST00000392456 DDX3XO00571 662 aaKnown RBP eCLIP20■□□□□ 0.793e-9■■■□□ 17.1
CCDC50-202ENST00000392456 KRT38O76015 456 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 HOXD10P28358 340 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 MAGEA1P43355 309 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 VAV2P52735 878 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 FAM47CQ5HY64 1035 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 ZNF572Q7Z3I7 529 aaPredicted RBP20■□□□□ 0.79
CCDC50-202ENST00000392456 PALB2Q86YC2 1186 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 NT5C1BQ96P26 610 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 GTF2IRD1Q9UHL9 959 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 ANO9A1A5B4 782 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 WFS1O76024 890 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 IDO1P14902 403 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 PIK3CAP42336 1068 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 NCALDP61601 193 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 NKX3-2P78367 333 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 TFAMQ00059 246 aaKnown RBP20■□□□□ 0.79
CCDC50-202ENST00000392456 CATSPER4Q7RTX7 472 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 LNX1Q8TBB1 728 aaPredicted RBP20■□□□□ 0.79
CCDC50-202ENST00000392456 SLC20A1Q8WUM9 679 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 SYT11Q9BT88 431 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 EIF2AQ9BY44 585 aaKnown RBP20■□□□□ 0.79
CCDC50-202ENST00000392456 STIM2Q9P246 746 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 HES2Q9Y543 173 aa20■□□□□ 0.79
CCDC50-202ENST00000392456 LACTBL1A8MY62 500 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 ACADSP16219 412 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 ITIH4Q14624 930 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 SNX17Q15036 470 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 CLPPQ16740 277 aaPredicted RBP19.99■□□□□ 0.79
CCDC50-202ENST00000392456 GLYCTKQ8IVS8 523 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 RNF19AQ9NV58 838 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 MACROD2A1Z1Q3 448 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 CYP26A1O43174 497 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 KRT86O43790 486 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 SGPL1O95470 568 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 MCF2P10911 925 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 SLC10A6Q3KNW5 377 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 WDR49Q8IV35 697 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 SHC3Q92529 594 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 PTPRN2Q92932 1015 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 FAM192AQ9GZU8 254 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 SH3GLB1Q9Y371 365 aa19.99■□□□□ 0.79
CCDC50-202ENST00000392456 KPNA6O60684 536 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 FKTNO75072 461 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 NFICP08651 508 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 RFX1P22670 979 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 CA8P35219 290 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 NCOA4Q13772 614 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 DDX27Q96GQ7 796 aaKnown RBP19.98■□□□□ 0.79
CCDC50-202ENST00000392456 RPF1Q9H9Y2 349 aaKnown RBP19.98■□□□□ 0.79
CCDC50-202ENST00000392456 NAGPAQ9UK23 515 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 INHAP05111 366 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 HOXD12P35452 270 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 IRGCQ6NXR0 463 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 SLC47A2Q86VL8 602 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 FAM71AQ8IYT1 594 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 CARD9Q9H257 536 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 CTNNAL1Q9UBT7 734 aa19.98■□□□□ 0.79
CCDC50-202ENST00000392456 E7ENQ6 273 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 KRT16P08779 473 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 MYL6P60660 151 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms