RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 CRYBG2Q8N1P7 616 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 SLC2A14Q8TDB8 520 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 SEPT8Q92599 483 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 C18orf8Q96DM3 657 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 MRPL47Q9HD33 250 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 SCINQ9Y6U3 715 aa12.89□□□□□ -0.35
SPTBN1-203ENST00000389980 CLDN5O00501 218 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 H2AFXP16104 143 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 GJA8P48165 433 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 OGDHQ02218 1023 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 NOMO2Q5JPE7 1267 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 FEZF2Q8TBJ5 459 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 CD101Q93033 1021 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 CALR3Q96L12 384 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 TBC1D13Q9NVG8 400 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 DNAJB4Q9UDY4 337 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 E5RJQ4 531 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 GABRDO14764 452 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 INPPL1O15357 1258 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 MRPS25P82663 173 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 CFAP221Q4G0U5 840 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 DCUN1D2Q6PH85 259 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 RHOXF2Q9BQY4 288 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
SPTBN1-203ENST00000389980 MICAL3Q7RTP6 2002 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TMEM191CA6NGB0 347 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 HSPA1AP0DMV8 641 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 HSPA1BP0DMV9 641 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PTPN1P18031 435 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 STILQ15468 1287 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 MDH1BQ5I0G3 518 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 EMC1Q8N766 993 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PBKQ96KB5 322 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 RBM12Q9NTZ6 932 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TMEM39AQ9NV64 488 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 HESX1Q9UBX0 185 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TSC2P49815 1807 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 GABBR2O75899 941 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PROSCO94903 275 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 SEC31AO94979 1220 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 KRT3P12035 628 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TCF4P15884 667 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 OR1G1P47890 313 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 PEX5P50542 639 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 RABGGTBP53611 331 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 DSC1Q08554 894 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 HINFPQ9BQA5 517 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 TBX21Q9UL17 535 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 STRIP2Q9ULQ0 834 aa12.87□□□□□ -0.35
SPTBN1-203ENST00000389980 F8VP50 259 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 GRAP2O75791 330 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 GJC1P36383 396 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 GABRB2P47870 512 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 TAS2R40P59535 323 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 UBL4BQ8N7F7 174 aa12.86□□□□□ -0.35
SPTBN1-203ENST00000389980 ANKRD52Q8NB46 1076 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms