RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 MDH1BQ5I0G3 518 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 FMNL3Q8IVF7 1028 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 ARID3AQ99856 593 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 STK33Q9BYT3 514 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 DPEP3Q9H4B8 488 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 PIDD1Q9HB75 910 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 AVENQ9NQS1 362 aaPredicted RBP18.78■□□□□ 0.6
CD9-202ENST00000382515 TMLHEQ9NVH6 421 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 DNAJC12Q9UKB3 198 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 NME7Q9Y5B8 376 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 PCDHB4Q9Y5E5 795 aa18.78■□□□□ 0.6
CD9-202ENST00000382515 TRIM66O15016 1216 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 VNN2O95498 520 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 FGF19O95750 216 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 UCHL3P15374 230 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SLC8A3P57103 927 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 RARS2Q5T160 578 aaKnown RBP18.77■□□□□ 0.6
CD9-202ENST00000382515 ARHGAP17Q68EM7 881 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 DPY19L2P1Q6NXN4 242 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 TMEM270Q6UE05 265 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 TMC5Q6UXY8 1006 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 ARHGEF19Q8IW93 802 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SLC4A11Q8NBS3 891 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SUSD6Q92537 303 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SMG7Q92540 1137 aaKnown RBP18.77■□□□□ 0.6
CD9-202ENST00000382515 MYLPFQ96A32 169 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 ZNF707Q96C28 371 aaPredicted RBP18.77■□□□□ 0.6
CD9-202ENST00000382515 IQCDQ96DY2 449 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SPATA17Q96L03 361 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 C8orf48Q96LL4 319 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 KREMEN1Q96MU8 473 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 UBXN6Q9BZV1 441 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SIX2Q9NPC8 291 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 SIK3Q9Y2K2 1263 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 YIPF1Q9Y548 306 aa18.77■□□□□ 0.6
CD9-202ENST00000382515 VWA8A3KMH1 1905 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 GRXCR2A6NFK2 248 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 H3BQ06 376 aaPredicted RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 ZNF197O14709 1029 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 MBTPS2O43462 519 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 RFPL2O75678 378 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 MICAL2O94851 1124 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 CSH1P0DML2 217 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 CSH2P0DML3 217 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 CYP2F1P24903 491 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 TWF1Q12792 350 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 SYCP1Q15431 976 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 C12orf76Q8N812 135 aaPredicted RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 NEK11Q8NG66 645 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 SHC3Q92529 594 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 PSMG2Q969U7 264 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 SMARCD1Q96GM5 515 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 SEPT5Q99719 369 aaPredicted RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
CD9-202ENST00000382515 B3GNT5Q9BYG0 378 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 EDEM3Q9BZQ6 932 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 COMMD8Q9NX08 183 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 COL6A3P12111 3177 aa18.76■□□□□ 0.59
CD9-202ENST00000382515 HCRTO43612 131 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 BDNFP23560 247 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 ANXA13P27216 316 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 GRIK1P39086 918 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 ZNF132P52740 706 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 CBX2Q14781 532 aaPredicted RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 SMAD2Q15796 467 aaKnown RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 CNGA2Q16280 664 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 TAF12Q16514 161 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 MEA1Q16626 185 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 SGO2Q562F6 1265 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 CYP4A22Q5TCH4 519 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 PTCRAQ6ISU1 281 aaPredicted RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 FUKQ8N0W3 1084 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 C12orf29Q8N999 325 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 TWNKQ96RR1 684 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 MED10Q9BTT4 135 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 LSM14BQ9BX40 385 aaKnown RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 CRISPLD1Q9H336 500 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 CSNK1G1Q9HCP0 422 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 WDR6Q9NNW5 1121 aaKnown RBP18.75■□□□□ 0.59
CD9-202ENST00000382515 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 ZMYM5Q9UJ78 669 aa18.75■□□□□ 0.59
CD9-202ENST00000382515 MED7O43513 233 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 FAM200BP0CF97 657 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 PTK2Q05397 1052 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 ARHGAP44Q17R89 818 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 PAQR9Q6ZVX9 377 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 DNAJB7Q7Z6W7 309 aaPredicted RBP18.74■□□□□ 0.59
CD9-202ENST00000382515 ANKRD52Q8NB46 1076 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 RBBP8NLQ8NC74 664 aaPredicted RBP18.74■□□□□ 0.59
CD9-202ENST00000382515 SLC2A14Q8TDB8 520 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 KAT5Q92993 513 aa18.74■□□□□ 0.59
CD9-202ENST00000382515 ASB2Q96Q27 587 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms