RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 WDR36Q8NI36 951 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 JADE3Q92613 823 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ESYT3A0FGR9 886 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 SERPING1P05155 500 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PRKACAP17612 351 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 RAB15P59190 212 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 FAM102AQ5T9C2 384 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 GCOM2Q9BZD3 368 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 AOX1Q06278 1338 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 FGGP02679 453 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ASNSP08243 561 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 AKAP5P24588 427 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 HOXA7P31268 230 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 AP1S2P56377 157 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 USP46P62068 366 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ARMC6Q6NXE6 501 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 DEFB128Q7Z7B8 93 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TRIM48Q8IWZ4 208 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 TRPC4APQ8TEL6 797 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 RMND5BQ96G75 393 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 APOL5Q9BWW9 433 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
CLCN4-202ENST00000380833 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
CLCN4-202ENST00000380833 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 KCNQ2O43526 872 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SLC16A1P53985 500 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 EIF2B5Q13144 721 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SNX17Q15036 470 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ANKS3Q6ZW76 656 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 NLRP10Q86W26 655 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SCUBE1Q8IWY4 988 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 CCDC33Q8N5R6 958 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 PPM1NQ8N819 430 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TTC8Q8TAM2 541 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 HAO1Q9UJM8 370 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 HMGB3O15347 200 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF614Q8N883 585 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 HASPINQ8TF76 798 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 PABPC5Q96DU9 382 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 PNKPQ96T60 521 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 CARMIL3Q8ND23 1372 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 POTECB2RU33 542 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF862O60290 1169 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ABCB1P08183 1280 aaPredicted RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 RALAP11233 206 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ADD2P35612 726 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SESN2P58004 480 aaPredicted RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TMEM143Q96AN5 459 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 WDR24Q96S15 920 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 BPIFA3Q9BQP9 254 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 GRIP2Q9C0E4 1043 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 MYRFQ9Y2G1 1151 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TTKP33981 857 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 HUNKP57058 714 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ITGA9Q13797 1035 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 KNOP1Q1ED39 458 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TYSND1Q2T9J0 566 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 NUDT18Q6ZVK8 323 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ZFP42Q96MM3 310 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 CNOT8Q9UFF9 292 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 PPIEQ9UNP9 301 aaKnown RBP11.19□□□□□ -0.62
CLCN4-202ENST00000380833 H3BQF6 201 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 CHN2P52757 468 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 SAMD3Q8N6K7 520 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 TRIM51Q9BSJ1 452 aa11.19□□□□□ -0.62
CLCN4-202ENST00000380833 ATP6V1C1P21283 382 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 TTC27Q6P3X3 843 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 SNX31Q8N9S9 440 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 DMTF1Q9Y222 760 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 RNF103O00237 685 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 FAM228BP0C875 321 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 CALB2P22676 271 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 FOXR1Q6PIV2 292 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 RD3Q7Z3Z2 195 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 LRRC34Q8IZ02 419 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PPP1R14AQ96A00 147 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 C6orf62Q9GZU0 229 aaPredicted RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 RXFP1Q9HBX9 757 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 ADAMTS1Q9UHI8 967 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms