RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 KRT71Q3SY84 523 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 SLC27A1Q6PCB7 646 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 CCDC89Q8N998 374 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 RAET1EQ8TD07 263 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 IPO4Q8TEX9 1081 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 SLITRK1Q96PX8 696 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 TRAIPQ9BWF2 469 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 STMN4Q9H169 189 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 ADAMTS10Q9H324 1103 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 CHST7Q9NS84 486 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 ASIC3Q9UHC3 531 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 GABRQQ9UN88 632 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 Q9Y3F1 56 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 A0A1W2PPC1 479 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 GNRH1P01148 92 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SMIM10L2AP0DMW4 78 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SMIM10L2BP0DMW5 78 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 KRT3P12035 628 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 RAP1GAPP47736 663 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 CPT1AP50416 773 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 HNRNPH2P55795 449 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 PSMC1P62191 440 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF252P-AS1Q0IIN9 211 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 PTPN20Q4JDL3 420 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 KCTD16Q68DU8 428 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 NOTUMQ6P988 496 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 RHBDF2Q6PJF5 856 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 CATSPER4Q7RTX7 472 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 LRRC52Q8N7C0 313 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 MCRS1Q96EZ8 462 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 PGM2Q96G03 612 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 CCDC114Q96M63 670 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 PPP1R16BQ96T49 567 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 ELOVL4Q9GZR5 314 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SMYD3Q9H7B4 428 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 DRG1Q9Y295 367 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-201ENST00000379340 MICAL2O94851 1124 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 NPTXRO95502 500 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CYP2C9P11712 490 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 PSMA2P25787 234 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GJC1P36383 396 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SNX16P57768 344 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 OGDHQ02218 1023 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SNX1Q13596 522 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 BYSLQ13895 437 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 MFSD10Q14728 455 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 TFDP3Q5H9I0 405 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 C6orf118Q5T5N4 469 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 OLFML2BQ68BL8 750 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 LCLAT1Q6UWP7 414 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 XYLT1Q86Y38 959 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 DEFB123Q8N688 67 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 BEST2Q8NFU1 509 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SNX27Q96L92 541 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 HERPUD2Q9BSE4 406 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 NT5C1AQ9BXI3 368 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CNOT10Q9H9A5 744 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 hCG_1818297A0A087WSY0 165 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 F8VP50 259 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 M0QYV0 167 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 HAS3O00219 553 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 O00370 1275 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 RIPK2O43353 540 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 XPOTO43592 962 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 LIASO43766 372 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GPR32O75388 356 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GJB6O95452 261 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 DARSP14868 501 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 ELNP15502 786 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 IVDP26440 423 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 MDH1P40925 334 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GPD2P43304 727 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 PSEN2P49810 448 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CDH8P55286 799 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 PPP2R2AP63151 447 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 PDCLQ13371 301 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms