RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SIX2Q9NPC8 291 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 ACP6Q9NPH0 428 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 DNAJC12Q9UKB3 198 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 YIPF1Q9Y548 306 aa12.48□□□□□ -0.41
DEPDC4-202ENST00000378244 CD19P15391 556 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 SSTR3P32745 418 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 RAD23BP54727 409 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 NTHL1P78549 312 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 FANCCQ00597 558 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 GCNT1Q02742 428 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 GRASPQ7Z6J2 395 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 UNC93AQ86WB7 457 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 USP15Q9Y4E8 981 aaPredicted RBP12.47□□□□□ -0.41
DEPDC4-202ENST00000378244 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 RNF225M0QZC1 329 aaPredicted RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 EPHB6O15197 1021 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 FAM163BP0C2L3 166 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 ATF6P18850 670 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 ACO1P21399 889 aaKnown RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 GRIK1P39086 918 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 CACNA2D1P54289 1103 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 MFAP3P55082 362 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 MAPRE1Q15691 268 aaKnown RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 PTCRAQ6ISU1 281 aaPredicted RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 SLC4A11Q8NBS3 891 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 TMEM176AQ96HP8 235 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 KCNK16Q96T55 309 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 NLRC4Q9NPP4 1024 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 TMEM30AQ9NV96 361 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 CEP72Q9P209 647 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 FHOD1Q9Y613 1164 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 IL9P15248 144 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 UBASH3AP57075 661 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 IQCEQ6IPM2 695 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 FUKQ8N0W3 1084 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 CRYBG2Q8N1P7 616 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 CORO1BQ9BR76 489 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 IFNKQ9P0W0 207 aa12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 MAGED2Q9UNF1 606 aaPredicted RBP12.46□□□□□ -0.41
DEPDC4-202ENST00000378244 F8VP50 259 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 UCHL3P15374 230 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 TRIM21P19474 475 aaKnown RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 YWHAEP62258 255 aaKnown RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 ITIH3Q06033 890 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 IFRD2Q12894 506 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 TAF12Q16514 161 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 CFAP221Q4G0U5 840 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 KLHDC7AQ5VTJ3 777 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 PAQR9Q6ZVX9 377 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 GPR149Q86SP6 731 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 RBBP8NLQ8NC74 664 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM170AA1A519 330 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 MBTPS2O43462 519 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 XYLBO75191 536 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 BEST1O76090 585 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 EPHB3P54753 998 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 SMARCB1Q12824 385 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM35AQ86V20 835 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 HDAC7Q8WUI4 952 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 FAXDC2Q96IV6 333 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 ZNF512Q96ME7 567 aaPredicted RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 DNMT3BQ9UBC3 853 aaKnown RBP12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 SIK3Q9Y2K2 1263 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 TRIOO75962 3097 aa12.45□□□□□ -0.42
DEPDC4-202ENST00000378244 A0A1B0GTH6 734 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 FOXN3O00409 490 aaPredicted RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 GJA1P17302 382 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 DRAP1Q14919 205 aaPredicted RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 ELMOD1Q8N336 334 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms