RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 GABPAQ06546 454 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 KCNH2Q12809 1159 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 MYLK3Q32MK0 819 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 RFX8Q6ZV50 586 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 PLEKHH3Q7Z736 793 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 SNX32Q86XE0 403 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 GALNT6Q8NCL4 622 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 IRGQQ8WZA9 623 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 C1orf74Q96LT6 269 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 RIT2Q99578 217 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 DNAJC18Q9H819 358 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 GTF3C4Q9UKN8 822 aa11.33□□□□□ -0.6
PCDHGA1-201ENST00000378105 TBX3O15119 743 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 CHRNB1P11230 501 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 PPATQ06203 517 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 RAD9BQ6WBX8 426 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZBTB46Q86UZ6 589 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 TRIML2Q8N7C3 387 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 LZICQ8WZA0 190 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 STK39Q9UEW8 545 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 GOLGA8SH3BPF8 625 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 SOX10P56693 466 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 RELAQ04206 551 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 TTC8Q8TAM2 541 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 FAM149B1Q96BN6 582 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 POLMQ9NP87 494 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 TYW1Q9NV66 732 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZBTB39O15060 712 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 ENTPD5O75356 428 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 DGAT1O75907 488 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 IFNA8P32881 189 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 MAP3K7CLP57077 242 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 PSMC6P62333 389 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 KLHL7Q8IXQ5 586 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 DDHD1Q8NEL9 900 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
PCDHGA1-201ENST00000378105 LOC105371267A0A1B0GV96 52 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZSCAN5CA6NGD5 496 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 THAP12O43422 761 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SNX2O60749 519 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 PAHP00439 452 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 CAPN1P07384 714 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 DPYDQ12882 1025 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 ZBTB17Q13105 803 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 KDM7AQ6ZMT4 941 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 ARHGAP24Q8N264 748 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 UROC1Q96N76 676 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 RNF38Q9H0F5 515 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 PRDM5Q9NQX1 630 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 FKBP14Q9NWM8 211 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 KRT75O95678 551 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 MFAP3P55082 362 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 GRB10Q13322 594 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 CYLC2Q14093 348 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SF3B4Q15427 424 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 CNGA3Q16281 694 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 C15orf59Q2T9L4 293 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 TREML2Q5T2D2 321 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 TATDN1Q6P1N9 297 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 VSTM4Q8IW00 320 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 Q8N9G6 341 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 ENGASEQ8NFI3 743 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 HYOU1Q9Y4L1 999 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 NVLO15381 856 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 PGM3O95394 542 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 CXCR5P32302 372 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SLCO1A2P46721 670 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 GPC3P51654 580 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 RIPK1Q13546 671 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 LRRC43Q8N309 656 aa11.31□□□□□ -0.6
PCDHGA1-201ENST00000378105 GIMAP1Q8WWP7 306 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms