RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ARID3AQ99856 593 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 CRACR2AQ9BSW2 395 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 PHF7Q9BWX1 381 aaPredicted RBP14.09□□□□□ -0.15
CKAP2-202ENST00000378034 ELOVL4Q9GZR5 314 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 DENND4AQ7Z401 1863 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 SLC9A1P19634 815 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 PON1P27169 355 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 COPB1P53618 953 aaKnown RBP14.09□□□□□ -0.15
CKAP2-202ENST00000378034 VEPH1Q14D04 833 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 PHLDB3Q6NSJ2 640 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 LRSAM1Q6UWE0 723 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 TMEM176AQ96HP8 235 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 VPS16Q9H269 839 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 POMKQ9H5K3 350 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 CBX8Q9HC52 389 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 APEX2Q9UBZ4 518 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 HMGXB4Q9UGU5 601 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 PTPRDP23468 1912 aa14.08□□□□□ -0.15
CKAP2-202ENST00000378034 CLUHO75153 1309 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 CYP2F1P24903 491 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 MFAP3P55082 362 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
CKAP2-202ENST00000378034 ARHGEF19Q8IW93 802 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 TTC9BQ8N6N2 239 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 PSMG2Q969U7 264 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 TWNKQ96RR1 684 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 UBE2TQ9NPD8 197 aaPredicted RBP14.08□□□□□ -0.16
CKAP2-202ENST00000378034 CEP72Q9P209 647 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 DNMT3BQ9UBC3 853 aaKnown RBP14.08□□□□□ -0.16
CKAP2-202ENST00000378034 KIAA1257Q9ULG3 409 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
CKAP2-202ENST00000378034 TRIM66O15016 1216 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 MICAL2O94851 1124 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 FGF19O95750 216 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 BDNFP23560 247 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 RAD23BP54727 409 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 EPHA5P54756 1037 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CCDC142Q17RM4 750 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 PABPC1LQ4VXU2 614 aaKnown RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 RRAGAQ7L523 313 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 ADHFE1Q8IWW8 467 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 SLC4A11Q8NBS3 891 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 C8orf48Q96LL4 319 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 LGALS16A8MUM7 142 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 GOLGA6L19H0YKK7 550 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF197O14709 1029 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 PAEPP09466 180 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CSH1P0DML2 217 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CSH2P0DML3 217 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 ATF6P18850 670 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 ACO1P21399 889 aaKnown RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 RFX1P22670 979 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CYP4A22Q5TCH4 519 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 DNAJB7Q7Z6W7 309 aaPredicted RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CYFIP2Q96F07 1278 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 SMARCD1Q96GM5 515 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 HEXIM2Q96MH2 286 aaKnown RBP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 KREMEN1Q96MU8 473 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 LPIN3Q9BQK8 851 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 MED10Q9BTT4 135 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 ASAH2Q9NR71 780 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 CNTN6Q9UQ52 1028 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 DAAM1Q9Y4D1 1078 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 PCDHB4Q9Y5E5 795 aa14.07□□□□□ -0.16
CKAP2-202ENST00000378034 XIRP2A4UGR9 3374 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 SOAT2O75908 522 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 RHOP08100 348 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ATP1A3P13637 1013 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 FSHRP23945 695 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ANXA13P27216 316 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 GRIK1P39086 918 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF445P59923 1031 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 KCNMA1Q12791 1236 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ORC1Q13415 861 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 TAF12Q16514 161 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF394Q53GI3 561 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 PAQR9Q6ZVX9 377 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 OTOP3Q7RTS5 596 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 FAM35AQ86V20 835 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 FUKQ8N0W3 1084 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 KAT5Q92993 513 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 CORO1BQ9BR76 489 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF518BQ9C0D4 1074 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 SIX2Q9NPC8 291 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 PLCB1Q9NQ66 1216 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 HCFC1R1Q9NWW0 138 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
CKAP2-202ENST00000378034 ZFP37Q9Y6Q3 630 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms