RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 KIAA1257Q9ULG3 409 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 CLDN5O00501 218 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 CXCL14O95715 111 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 MMEP08473 750 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 CCDC172P0C7W6 258 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 ARPP19P56211 112 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 CDK17Q00537 523 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 CDR2Q01850 454 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 FAM35AQ86V20 835 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 MRPL43Q8N983 215 aaKnown RBP22.61■■□□□ 1.21
CBWD3-202ENST00000377342 CYFIP2Q96F07 1278 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 ZNF518BQ9C0D4 1074 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 TMEM30AQ9NV96 361 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 TSPAN16Q9UKR8 245 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 SSX2IPQ9Y2D8 614 aa22.61■■□□□ 1.21
CBWD3-202ENST00000377342 MTCL1Q9Y4B5 1905 aaKnown RBP22.6■■□□□ 1.21
CBWD3-202ENST00000377342 NDUFV1P49821 464 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 CREMQ03060 361 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 GPR17Q13304 367 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 GOLGA7BQ2TAP0 167 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 RNF19BQ6ZMZ0 732 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 TTC30AQ86WT1 665 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 DCP1BQ8IZD4 617 aaKnown RBP22.6■■□□□ 1.21
CBWD3-202ENST00000377342 PGLYRP2Q96PD5 576 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 HNRNPABQ99729 332 aaKnown RBP22.6■■□□□ 1.21
CBWD3-202ENST00000377342 LMAN2LQ9H0V9 348 aa22.6■■□□□ 1.21
CBWD3-202ENST00000377342 NGRNQ9NPE2 291 aaKnown RBP22.6■■□□□ 1.21
CBWD3-202ENST00000377342 ZNHIT6Q9NWK9 470 aaKnown RBP22.6■■□□□ 1.21
CBWD3-202ENST00000377342 MTMR11A4FU01 709 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 MICAL2O94851 1124 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 ADORA2BP29275 332 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 CA8P35219 290 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 CYP27A1Q02318 531 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 RAB33AQ14088 237 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 MAPRE1Q15691 268 aaKnown RBP22.59■■□□□ 1.21
CBWD3-202ENST00000377342 CNGA2Q16280 664 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 TSR1Q2NL82 804 aaKnown RBP22.59■■□□□ 1.21
CBWD3-202ENST00000377342 PKDCCQ504Y2 493 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 LCLAT1Q6UWP7 414 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 ZNF677Q86XU0 584 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 LRRC8AQ8IWT6 810 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 TTC9BQ8N6N2 239 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 KLHL5Q96PQ7 755 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 AGPAT1Q99943 283 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 DNAI2Q9GZS0 605 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 CRISPLD1Q9H336 500 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 PCDHGC3Q9UN70 934 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 BZW2Q9Y6E2 419 aaKnown RBP22.59■■□□□ 1.21
CBWD3-202ENST00000377342 SZT2Q5T011 3432 aa22.59■■□□□ 1.21
CBWD3-202ENST00000377342 TMEM265A0A087WTH1 108 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 EIF4A3P38919 411 aaKnown RBP22.58■■□□□ 1.21
CBWD3-202ENST00000377342 CACNA2D1P54289 1103 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 MAPK8IP2Q13387 824 aaPredicted RBP22.58■■□□□ 1.21
CBWD3-202ENST00000377342 ASTE1Q2TB18 679 aaPredicted RBP22.58■■□□□ 1.21
CBWD3-202ENST00000377342 PASD1Q8IV76 773 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 PCDHB18PQ96TA0 734 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 KRT82Q9NSB4 513 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 GREB1Q4ZG55 1949 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 REV3LO60673 3130 aa22.58■■□□□ 1.21
CBWD3-202ENST00000377342 M0QYV0 167 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 ABLIM3O94929 683 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 CCZ1BP86790 482 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 CCZ1P86791 482 aaPredicted RBP22.58■■□□□ 1.2
CBWD3-202ENST00000377342 STILQ15468 1287 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 NFE2Q16621 373 aaPredicted RBP22.58■■□□□ 1.2
CBWD3-202ENST00000377342 DENND1BQ6P3S1 775 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 ATAD1Q8NBU5 361 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 LRCH3Q96II8 777 aa22.58■■□□□ 1.2
CBWD3-202ENST00000377342 BAG1Q99933 345 aaPredicted RBP22.58■■□□□ 1.2
CBWD3-202ENST00000377342 ABI2Q9NYB9 513 aaPredicted RBP22.58■■□□□ 1.2
CBWD3-202ENST00000377342 SSU72P8A0A1W2PR75 194 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 SOWAHDA6NJG2 315 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 DDX3XO00571 662 aaKnown RBP eCLIP22.57■■□□□ 1.2
CBWD3-202ENST00000377342 MED7O43513 233 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 CFAP221Q4G0U5 840 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 PDE12Q6L8Q7 609 aaKnown RBP22.57■■□□□ 1.2
CBWD3-202ENST00000377342 C4orf50Q6ZRC1 276 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 ADGRD2Q7Z7M1 963 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 SLC30A5Q8TAD4 765 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 KCNF1Q9H3M0 494 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 NHEJ1Q9H9Q4 299 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-202ENST00000377342 NENFQ9UMX5 172 aa22.57■■□□□ 1.2
CBWD3-202ENST00000377342 BEST1O76090 585 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 PTMAP06454 111 aaKnown RBP22.56■■□□□ 1.2
CBWD3-202ENST00000377342 BDNFP23560 247 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 MTF1Q14872 753 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 CYP26C1Q6V0L0 522 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 SPATA2LQ8IUW3 424 aaPredicted RBP22.56■■□□□ 1.2
CBWD3-202ENST00000377342 ZNF461Q8TAF7 563 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 UBA3Q8TBC4 463 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 MICAL1Q8TDZ2 1067 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 SMARCD1Q96GM5 515 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 FUBP3Q96I24 572 aaKnown RBP eCLIP22.56■■□□□ 1.2
CBWD3-202ENST00000377342 MED10Q9BTT4 135 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 EMILIN2Q9BXX0 1053 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 AFF4Q9UHB7 1163 aaKnown RBP22.56■■□□□ 1.2
CBWD3-202ENST00000377342 CYTH4Q9UIA0 394 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 PCDHB5Q9Y5E4 795 aa22.56■■□□□ 1.2
CBWD3-202ENST00000377342 PRRC2BQ5JSZ5 2229 aaKnown RBP22.56■■□□□ 1.2
CBWD3-202ENST00000377342 CYP1A1P04798 512 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms