RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 DIS3Q9Y2L1 958 aaKnown RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 A6NNZ2 444 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SOX11P35716 441 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 MAGEA9P43362 315 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 MAMLD1Q13495 774 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SPARCL1Q14515 664 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 TUBB8Q3ZCM7 444 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SMC1BQ8NDV3 1235 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 PDCD6IPQ8WUM4 868 aaKnown RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 TIPINQ9BVW5 301 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 HCRTO43612 131 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 NCF2P19878 526 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 GNL1P36915 607 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SH3PXD2AQ5TCZ1 1133 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 LGSNQ5TDP6 509 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SLC39A4Q6P5W5 647 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 CCDC62Q6P9F0 684 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SDCCAG8Q86SQ7 713 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 C18orf25Q96B23 403 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 CDT1Q9H211 546 aa11.67□□□□□ -0.54
HDAC6-203ENST00000376619 PRMT7Q9NVM4 692 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-203ENST00000376619 PTPRJQ12913 1337 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 MYH3P11055 1940 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 LGALS2P05162 132 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 CD48P09326 243 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 ITIH2P19823 946 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 DCAF12L1Q5VU92 463 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 CFAP61Q8NHU2 1237 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
HDAC6-203ENST00000376619 PCDHA3Q9Y5H8 950 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 MYH11P35749 1972 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 TXNDC9O14530 226 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 RGS20O76081 388 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 MICAL1Q8TDZ2 1067 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 STMN2Q93045 179 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 TPX2Q9ULW0 747 aaKnown RBP11.66□□□□□ -0.54
HDAC6-203ENST00000376619 NAALADL1Q9UQQ1 740 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 DFFAO00273 331 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 COPEO14579 308 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 SLC25A27O95847 323 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 MARSP56192 900 aaKnown RBP11.66□□□□□ -0.54
HDAC6-203ENST00000376619 SNX16P57768 344 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 LPPQ93052 612 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 CNOT10Q9H9A5 744 aaKnown RBP11.66□□□□□ -0.54
HDAC6-203ENST00000376619 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
HDAC6-203ENST00000376619 GPR25O00155 361 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 MIPP30301 263 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 SLC1A1P43005 524 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 SPOCD1Q6ZMY3 1216 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 IQCKQ8N0W5 287 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 FBXO36Q8NEA4 188 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 APPL2Q8NEU8 664 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ATXN3LQ9H3M9 355 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 PCMTD2Q9NV79 361 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 IL1RAPL1Q9NZN1 696 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CLDN5O00501 218 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 RIPK2O43353 540 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 F7P08709 466 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 NCAM1P13591 858 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 SULT1E1P49888 294 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 TFDP2Q14188 446 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 GRIK4Q16099 956 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 PCSK7Q16549 785 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 DGKDQ16760 1214 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ZC3H12AQ5D1E8 599 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 UBAP2Q5T6F2 1119 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 RMDN2Q96LZ7 410 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ZFP42Q96MM3 310 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 HMGXB4Q9UGU5 601 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 TJP1Q07157 1748 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 C2CD2LO14523 706 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 SPTLC1O15269 473 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CFLARO15519 480 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 LPXNO60711 386 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CDH16O75309 829 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 PPFIA2O75334 1257 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 TOMM70O94826 608 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms