RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PDGFDQ9GZP0 370 aaPredicted RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 APOBEC3GQ9HC16 384 aaKnown RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 ACSS2Q9NR19 701 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 SMCHD1A6NHR9 2005 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 UNC5CO95185 931 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 LDHAP00338 332 aaKnown RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 EGFRP00533 1210 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 ITGB3P05106 788 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 NOMO3P69849 1222 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 CHI3L2Q15782 390 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 C15orf59Q2T9L4 293 aaPredicted RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 KBTBD12Q3ZCT8 623 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 GLRA4Q5JXX5 417 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 MICALL2Q8IY33 904 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 HACE1Q8IYU2 909 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 DNAAF3Q8N9W5 541 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 RFWD2Q8NHY2 731 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 HESX1Q9UBX0 185 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 FAM237BA0A1B0GVD1 139 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 C5orf60A6NFR6 353 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 A6NJR5 290 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 KBTBD13C9JR72 458 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 MGRN1O60291 552 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 KRT37O76014 449 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 ADORA2BP29275 332 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 RGS9BPQ6ZS82 235 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 OTOAQ7RTW8 1153 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 ARHGAP24Q8N264 748 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 UNKQ9C0B0 810 aaKnown RBP15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 STOML1Q9UBI4 398 aa15.06■□□□□ 0
TNFRSF1B-201ENST00000376259 CREB3O43889 395 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 LUC7L3O95232 432 aaKnown RBP15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 CXCL8P10145 99 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 DPEP1P16444 411 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 WNT7BP56706 349 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 DENND1BQ6P3S1 775 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 CES3Q6UWW8 571 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 SYDE1Q6ZW31 735 aaPredicted RBP15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 KDELC2Q7Z4H8 507 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 NLRP7Q8WX94 980 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 TMEM120AQ9BXJ8 343 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 ACAD9Q9H845 621 aa15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 ZMYND8Q9ULU4 1186 aaPredicted RBP15.05■□□□□ 0
TNFRSF1B-201ENST00000376259 MAP3K7O43318 606 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 LIASO43766 372 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 KRT7P08729 469 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 PAEPP09466 180 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 FDX1P10109 184 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 GDF10P55107 478 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 GCNT1Q02742 428 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 KPNB1Q14974 876 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 KLHL38Q2WGJ6 581 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 DPY19L2P1Q6NXN4 242 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 TTC7BQ86TV6 843 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 MAP7D3Q8IWC1 876 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 UNC45BQ8IWX7 931 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 TMC2Q8TDI7 906 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 SCOCQ9UIL1 159 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 NEMP1O14524 444 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 NVLO15381 856 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 PSTPIP1O43586 416 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 KRT36O76013 467 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 SKIP12755 728 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 GLRA2P23416 452 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 NR1H3Q13133 447 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 LACTB2Q53H82 288 aaPredicted RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 C16orf46Q6P387 395 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 TRIM72Q6ZMU5 477 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 TRABD2AQ86V40 505 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 CRLF3Q8IUI8 442 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 ZC3H3Q8IXZ2 948 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 PPP4R1Q8TF05 950 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 RNF34Q969K3 372 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 CDHR1Q96JP9 859 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 TRIM56Q9BRZ2 755 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 MRPL4Q9BYD3 311 aaKnown RBP15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 GGA2Q9UJY4 613 aa15.05■□□□□ -0
TNFRSF1B-201ENST00000376259 MAPTP10636 758 aaKnown RBP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 LCP1P13796 627 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 PHKA2P46019 1235 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 LY6KQ17RY6 165 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 SLC39A4Q6P5W5 647 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 BZW1Q7L1Q6 419 aaKnown RBP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 NIF3L1Q9GZT8 377 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 ZNF395Q9H8N7 513 aaPredicted RBP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 NKX1-2Q9UD57 310 aaPredicted RBP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 CHKBQ9Y259 395 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 TRPA1O75762 1119 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 F7P08709 466 aaPredicted RBP15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 BNIP1Q12981 228 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 ZACNQ401N2 412 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 PPIL6Q8IXY8 311 aa15.04■□□□□ -0
TNFRSF1B-201ENST00000376259 RNF169Q8NCN4 708 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms