RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TRIM25Q14258 630 aaKnown RBP10.21□□□□□ -0.77
SPEN-201ENST00000375759 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.77
SPEN-201ENST00000375759 PHF20Q9BVI0 1012 aa10.21□□□□□ -0.77
SPEN-201ENST00000375759 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 ALDH1A1P00352 501 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 PTGER2P43116 358 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 NT5C1AQ9BXI3 368 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 NPHP3-ACAD11A0A0J9YXS1 232 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TRIM49D1C9J1S8 452 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TIMM44O43615 452 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TGM2P21980 687 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 PSMC6P62333 389 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 PURAQ00577 322 aaKnown RBP10.21□□□□□ -0.78
SPEN-201ENST00000375759 FEZF2Q8TBJ5 459 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 PABPC5Q96DU9 382 aaKnown RBP10.21□□□□□ -0.78
SPEN-201ENST00000375759 FAM111AQ96PZ2 611 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CPVLQ9H3G5 476 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 RGL1Q9NZL6 768 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 NFKBIL1Q9UBC1 381 aaPredicted RBP10.21□□□□□ -0.78
SPEN-201ENST00000375759 ARHGEF7Q14155 803 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 FAM192AQ9GZU8 254 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CLEC16AQ2KHT3 1053 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 LAYNQ6UX15 382 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TTC30AQ86WT1 665 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CENPLQ8N0S6 344 aaPredicted RBP10.21□□□□□ -0.78
SPEN-201ENST00000375759 OR8H2Q8N162 312 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 KRT78Q8N1N4 520 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 RNF149Q8NC42 400 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 RMND5AQ9H871 391 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CST8O60676 142 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 CD4P01730 458 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 PRKCBP05771 671 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 RBP3P10745 1247 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TWF1Q12792 350 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 TFDP3Q5H9I0 405 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 MMP19Q99542 508 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 SMARCAD1Q9H4L7 1026 aa10.21□□□□□ -0.78
SPEN-201ENST00000375759 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 ANXA9O76027 345 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CPB1P15086 417 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CYP51A1Q16850 503 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 FAM71DQ8N9W8 422 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 BCL10O95999 233 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CNTN1Q12860 1018 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CNGA2Q16280 664 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SUSD4Q5VX71 490 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 POLD4Q9HCU8 107 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 TAGLN3Q9UI15 199 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 ERBB3P21860 1342 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 PRDX5P30044 214 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SARSP49591 514 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 SF3B3Q15393 1217 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 TRAPPC9Q96Q05 1148 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 PCSK7Q16549 785 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 USP13Q92995 863 aaPredicted RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 MASTLQ96GX5 879 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SNX13Q9Y5W8 968 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 IGSF9BQ9UPX0 1349 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 GPD1P21695 349 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SLC16A1P53985 500 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SPRTNQ9H040 489 aaPredicted RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 L2HGDHQ9H9P8 463 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 ATAD3AQ9NVI7 634 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 UTP6Q9NYH9 597 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 FHOD1Q9Y613 1164 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 OASLQ15646 514 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 CASKIN2Q8WXE0 1202 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CENPXA8MT69 81 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 CNOT3O75175 753 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 DENND1BQ6P3S1 775 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 ADCK2Q7Z695 626 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 KDM6BO15054 1643 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 STX7O15400 261 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 MAPK1P28482 360 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SERPINH1P50454 418 aaKnown RBP10.2□□□□□ -0.78
SPEN-201ENST00000375759 KCNMA1Q12791 1236 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 TTLL9Q3SXZ7 439 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 LPCAT2Q7L5N7 544 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SPASTQ9UBP0 616 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 TMCC3Q9ULS5 477 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 LRCH1Q9Y2L9 728 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 AKR1B1P15121 316 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 SNX17Q15036 470 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 MUC3BQ9H195 1237 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 TMBIM4Q9HC24 238 aa10.2□□□□□ -0.78
SPEN-201ENST00000375759 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPEN-201ENST00000375759 GLI2P10070 1586 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 SLC9A5Q14940 896 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 RASA2Q15283 850 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 SMTNL2Q2TAL5 461 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 IPMKQ8NFU5 416 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 ZNF669Q96BR6 464 aaPredicted RBP10.19□□□□□ -0.78
SPEN-201ENST00000375759 NMD3Q96D46 503 aaKnown RBP10.19□□□□□ -0.78
SPEN-201ENST00000375759 FUT8Q9BYC5 575 aa10.19□□□□□ -0.78
SPEN-201ENST00000375759 UBE2OQ9C0C9 1292 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms