RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 FAXCQ5TGI0 409 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 C1orf228Q6PIY5 440 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 ZCCHC9Q8N567 271 aaKnown RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 CCDC63Q8NA47 563 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 ACTR5Q9H9F9 607 aaPredicted RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 BRCA2P51587 3418 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 SOCS7O14512 581 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 STAG3L1P0CL83 205 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 CA4P22748 312 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 VCPP55072 806 aaKnown RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 CELF3Q5SZQ8 465 aaKnown RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 FNBP1LQ5T0N5 605 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 FAM102AQ5T9C2 384 aaPredicted RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.94■□□□□ 0.46
RXRB-201ENST00000374680 PARP9Q8IXQ6 854 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 DCPSQ96C86 337 aaKnown RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 ABLIM1O14639 778 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 INSRRP14616 1297 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 POLR2BP30876 1174 aaKnown RBP17.93■□□□□ 0.46
RXRB-201ENST00000374680 RPA3P35244 121 aaPredicted RBP17.93■□□□□ 0.46
RXRB-201ENST00000374680 CAV1Q03135 178 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
RXRB-201ENST00000374680 AMHR2Q16671 573 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 PITPNM3Q9BZ71 974 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 ELOVL4Q9GZR5 314 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 TRABDQ9H4I3 376 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 RBPJLQ9UBG7 517 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 GGA2Q9UJY4 613 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 GCAP28676 217 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 ATP5DP30049 168 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 RAD23BP54727 409 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 MCL1Q07820 350 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 OR6B2Q6IFH4 312 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 NETO2Q8NC67 525 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 CKAP2Q8WWK9 683 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 KDM4CQ9H3R0 1056 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 MCM3APO60318 1980 aa17.93■□□□□ 0.46
RXRB-201ENST00000374680 ACKR2O00590 384 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 AVILO75366 819 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 MIPP30301 263 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 PIGHQ14442 188 aaPredicted RBP17.92■□□□□ 0.46
RXRB-201ENST00000374680 SPATA21Q7Z572 469 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 UBR7Q8N806 425 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 CFAP57Q96MR6 1250 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 MMP19Q99542 508 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 A8MUI8 341 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 STAT4Q14765 748 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
RXRB-201ENST00000374680 C3orf62Q6ZUJ4 267 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 FITM2Q8N6M3 262 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 PYROXD1Q8WU10 500 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 PRCCQ92733 491 aaPredicted RBP17.92■□□□□ 0.46
RXRB-201ENST00000374680 MAGEB5Q9BZ81 275 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 ECT2Q9H8V3 914 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 FAM49BQ9NUQ9 324 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 HEY1Q9Y5J3 304 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 TCRBV5S1A1TA0A578 114 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 MICAL2O94851 1124 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 SUN1O94901 812 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 FAM228AQ86W67 206 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 BBOF1Q8ND07 529 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 FGD4Q96M96 766 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 CHMP2BQ9UQN3 213 aa17.92■□□□□ 0.46
RXRB-201ENST00000374680 ATXN2Q99700 1313 aaKnown RBP17.91■□□□□ 0.46
RXRB-201ENST00000374680 HCRTO43612 131 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 EDNRBP24530 442 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 ABCD1P33897 745 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 RPL22P35268 128 aaKnown RBP17.91■□□□□ 0.46
RXRB-201ENST00000374680 MYO1EQ12965 1108 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 OASLQ15646 514 aaKnown RBP17.91■□□□□ 0.46
RXRB-201ENST00000374680 SLC1A5Q15758 541 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 HIF1AQ16665 826 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 CGB2Q6NT52 195 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 SLC4A11Q8NBS3 891 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 MAML1Q92585 1016 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 GRID1Q9ULK0 1009 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 HES2Q9Y543 173 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 NR2E3Q9Y5X4 410 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 CNMDO75829 334 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 KRT4P19013 534 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 KDELR1P24390 212 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 GLRA4Q5JXX5 417 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 ARHGEF18Q6ZSZ5 1173 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 SGSM3Q96HU1 749 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 ADPGKQ9BRR6 497 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 APOL6Q9BWW8 343 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 NGRNQ9NPE2 291 aaKnown RBP17.91■□□□□ 0.46
RXRB-201ENST00000374680 L3MBTL1Q9Y468 752 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 ARID2Q68CP9 1835 aa17.91■□□□□ 0.46
RXRB-201ENST00000374680 FAM47DPA6NHR8 397 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 RBP3P10745 1247 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 TAC1P20366 129 aa17.9■□□□□ 0.46
RXRB-201ENST00000374680 EIF4BP23588 611 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
RXRB-201ENST00000374680 CDH6P55285 790 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms