RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HOXC8P31273 242 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 MDH1P40925 334 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ADCYAP1R1P41586 468 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 GPD2P43304 727 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNF143P52747 638 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 PPP2R2AP63151 447 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ADAM17P78536 824 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNF844Q08AG5 666 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNF211Q13398 564 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SV2CQ496J9 727 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ZBTB41Q5SVQ8 909 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 MARCH8Q5T0T0 291 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 JADE1Q6IE81 842 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SPOPLQ6IQ16 392 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ALKAL1Q6UXT8 129 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 BBS12Q6ZW61 710 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CATSPER4Q7RTX7 472 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TMEM110Q86TL2 294 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SESTD1Q86VW0 696 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CRYBG2Q8N1P7 616 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CMASQ8NFW8 434 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 FBXO25Q8TCJ0 367 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 APBB2Q92870 758 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CFAP57Q96MR6 1250 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SLITRK1Q96PX8 696 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 APBA2Q99767 749 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TRIM62Q9BVG3 475 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 EPN3Q9H201 632 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ADAMTS10Q9H324 1103 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CCDC134Q9H6E4 229 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 PCDH9Q9HC56 1237 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 PDGFCQ9NRA1 345 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 RCOR3Q9P2K3 495 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ASIC3Q9UHC3 531 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SIX4Q9UIU6 781 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 PLXNA1Q9UIW2 1896 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ANAPC5Q9UJX4 755 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TELO2Q9Y4R8 837 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SQORQ9Y6N5 450 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 M0QZ92 97 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 O00370 1275 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 MDM4O15151 490 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RGS16O15492 202 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 LIASO43766 372 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 CAND2O75155 1236 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 CDH16O75309 829 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 DUSP11O75319 330 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TTC4O95801 387 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 IGHA2P01877 340 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT14P02533 472 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 APOC2P02655 101 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 EDN1P05305 212 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RALAP11233 206 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 AKR1A1P14550 325 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 CD19P15391 556 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 PSMA2P25787 234 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 PHBP35232 272 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 ADCY8P40145 1251 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RPL21P46778 160 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 NR2C2P49116 596 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RPL34P49207 117 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT17Q04695 432 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT71Q3SY84 523 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TNFAIP8L3Q5GJ75 292 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 LMBRD2Q68DH5 695 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RHBDF2Q6PJF5 856 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 ZDHHC24Q6UX98 284 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 SPOCD1Q6ZMY3 1216 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 MOB2Q70IA6 237 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 LIMS2Q7Z4I7 341 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TDRPQ86YL5 185 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TMEM86AQ8N2M4 240 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 ZCCHC9Q8N567 271 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TOP6BLQ8N6T0 577 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TLCD1Q96CP7 247 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 SNX27Q96L92 541 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 HEXIM2Q96MH2 286 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 MAK16Q9BXY0 300 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 CELF4Q9BZC1 486 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 TRIM6Q9C030 488 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 DPH5Q9H2P9 285 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 MINDY3Q9H8M7 445 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 RRN3Q9NYV6 651 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 GTF2IRD1Q9UHL9 959 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 AGAP1Q9UPQ3 857 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 SNX24Q9Y343 169 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 NEU2Q9Y3R4 380 aa9.17□□□□□ -0.94
SNRNP40-202ENST00000373720 hCG_1818297A0A087WSY0 165 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms