RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CDH19Q9H159 772 aa11.14□□□□□ -0.63
TRERF1-203ENST00000372917 NOL6Q9H6R4 1146 aaKnown RBP11.14□□□□□ -0.63
TRERF1-203ENST00000372917 S100A14Q9HCY8 104 aa11.14□□□□□ -0.63
TRERF1-203ENST00000372917 MED1Q15648 1581 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 KIF13AQ9H1H9 1805 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 MYH11P35749 1972 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 IL32P24001 234 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 LIFRP42702 1097 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 EPHB1P54762 984 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ZDHHC24Q6UX98 284 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 CADM3Q8N126 398 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SLC7A3Q8WY07 619 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 PTCD3Q96EY7 689 aaKnown RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 CCDC77Q9BR77 488 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 AIFM2Q9BRQ8 373 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 IER2Q9BTL4 223 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 TMEM109Q9BVC6 243 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 LRRC4BQ9NT99 713 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 BCAP29Q9UHQ4 241 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 C1orf232A0A0U1RR37 186 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 GOLGA8MH3BSY2 632 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 PSMD12O00232 456 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 PRLP01236 227 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 NELFEP18615 380 aaKnown RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF211Q13398 564 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 UBE2UQ5VVX9 321 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 CYP2U1Q7Z449 544 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 GPR141Q7Z602 305 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 RFWD2Q8NHY2 731 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 EHMT1Q9H9B1 1298 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 TRIM39Q9HCM9 518 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 IP6K2Q9UHH9 426 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 A0A087X0T9 212 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 FAM228BP0C875 321 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 RARGP13631 454 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 HADHAP40939 763 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 MAGEA4P43358 317 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 RPL21P46778 160 aaKnown RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 LRRC63Q05C16 580 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 CALCOCO2Q13137 446 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SYNE4Q8N205 404 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ATL1Q8WXF7 558 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SGCDQ92629 289 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 KRT35Q92764 455 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
TRERF1-203ENST00000372917 EBF1Q9UH73 591 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 SLC7A8Q9UHI5 535 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
TRERF1-203ENST00000372917 ABCB11O95342 1321 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PHKA1P46020 1223 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 ASIC1P78348 528 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GBE1Q04446 702 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 SCARF1Q14162 830 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 LVRNQ6Q4G3 990 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 TSPAN14Q8NG11 270 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 SDR42E1Q8WUS8 393 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PCDHA4Q9UN74 947 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GOLGA8QA0A0J9YX86 632 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GOLGA8OA6NCC3 632 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GOLGA8NF8WBI6 632 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 TMX2-CTNND1H3BSU7 103 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GOLGA8RI6L899 631 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 KIAA0391O15091 583 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CLOCKO15516 846 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PEX1O43933 1283 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PIM1P11309 404 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PDE6AP16499 860 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CA4P22748 312 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PEX3P56589 373 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 IRX4P78413 519 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 MYBPC1Q00872 1141 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 IFITM2Q01629 132 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GNA12Q03113 381 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 C10orf76Q5T2E6 689 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 BORAQ6PGQ7 559 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 ATP6V0D2Q8N8Y2 350 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 ANKRD49Q8WVL7 239 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 DHRS9Q9BPW9 319 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 IMPG2Q9BZV3 1241 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 AP4B1Q9Y6B7 739 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GSTTP1A0A1W2PQM5 241 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms