RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 FAM171A1Q5VUB5 890 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 TTI2Q6NXR4 508 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ITIH5Q86UX2 942 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 AGR3Q8TD06 166 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 SLC26A7Q8TE54 656 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ELMO2Q96JJ3 720 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 WDR18Q9BV38 432 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 HPSEQ9Y251 543 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 TMEM150BA6NC51 233 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ANXA9O76027 345 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 KLRC2P26717 231 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ZRANB3Q5FWF4 1079 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CENPPQ6IPU0 288 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 VSIG10LQ86VR7 867 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CNPY4Q8N129 248 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ADAM33Q9BZ11 813 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 GOLPH3Q9H4A6 298 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CYP39A1Q9NYL5 469 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CLCA2Q9UQC9 943 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CHMP2BQ9UQN3 213 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 GOLGA8RI6L899 631 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 TBC1D12O60347 775 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 SNCBQ16143 134 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 TFB1MQ8WVM0 346 aaKnown RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 LZICQ8WZA0 190 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CCDC138Q96M89 665 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ASB7Q9H672 318 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 ARFIP2P53365 341 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 PHEXP78562 749 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 SFSWAPQ12872 951 aaKnown RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 LRRC14Q15048 493 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 ZPBP2Q6X784 338 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 TRMT10CQ7L0Y3 403 aaKnown RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 FAM71DQ8N9W8 422 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 USP13Q92995 863 aaPredicted RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 EML4Q9HC35 981 aaKnown RBP15.36■□□□□ 0.05
NDC1-201ENST00000371429 CHST12Q9NRB3 414 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CRLS1Q9UJA2 301 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 PCDHB5Q9Y5E4 795 aa15.36■□□□□ 0.05
NDC1-201ENST00000371429 CYTH3O43739 400 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 RFC1P35251 1148 aaPredicted RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 KCNJ1P48048 391 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 C4orf22Q6V702 233 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 FBXL16Q8N461 479 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 SYT17Q9BSW7 474 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 FKTNO75072 461 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 PGK1P00558 417 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 CCZ1BP86790 482 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 CCZ1P86791 482 aaPredicted RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 CRY2Q49AN0 593 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 POTEAQ6S8J7 498 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 IPPQ9Y573 584 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 A0A087X0T9 212 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 SMAPO00193 183 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 GYG2O15488 501 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 E2F6O75461 281 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 FAM228BP0C875 321 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 DDX5P17844 614 aaKnown RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 FBXW4P57775 412 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 MTM1Q13496 603 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 PRAMEF19Q5SWL8 479 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 SLFN11Q7Z7L1 901 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 CARNMT1Q8N4J0 409 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 FAM172AQ8WUF8 416 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 ADAM2Q99965 735 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 TRABDQ9H4I3 376 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 TARSL2A2RTX5 802 aaKnown RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 SPRP35270 261 aaPredicted RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 TKTL1P51854 596 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
NDC1-201ENST00000371429 MAP2K5Q13163 448 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 EFTUD2Q15029 972 aaKnown RBP eCLIP15.35■□□□□ 0.057e-9■■■□□ 18.3
NDC1-201ENST00000371429 TMCO4Q5TGY1 634 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
NDC1-201ENST00000371429 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 SYNDIG1LA6NDD5 238 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 RNASEH1O60930 286 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 SERPINB9P50453 376 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ARHGDIAP52565 204 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 CENPCQ03188 943 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 IKBKEQ14164 716 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 HIBCHQ6NVY1 386 aaPredicted RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 FAM131BQ86XD5 332 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 JAMLQ86YT9 394 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 CIPCQ9C0C6 399 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 INTS13Q9NVM9 706 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 CHRM3P20309 590 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 VCPP55072 806 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 AMPD2Q01433 879 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ANKS3Q6ZW76 656 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 FOXP3Q9BZS1 431 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ZFP69BQ9UJL9 534 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 SLC25A13Q9UJS0 675 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms