RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 F8W810 466 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 DGKIO75912 1065 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 BAIAP3O94812 1187 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 CYP1A1P04798 512 aaPredicted RBP18.33■□□□□ 0.53
UBE3D-203ENST00000369747 ATICP31939 592 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 ASPAP45381 313 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 RNASELQ05823 741 aaKnown RBP18.33■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF211Q13398 564 aaPredicted RBP18.33■□□□□ 0.53
UBE3D-203ENST00000369747 TUSC3Q13454 348 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 TRADDQ15628 312 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 UPP1Q16831 310 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 PAN2Q504Q3 1202 aaKnown RBP18.33■□□□□ 0.53
UBE3D-203ENST00000369747 SCARA5Q6ZMJ2 495 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 UBR7Q8N806 425 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 NFU1Q9UMS0 254 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 NR2E1Q9Y466 385 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 PTPRSQ13332 1948 aa18.33■□□□□ 0.53
UBE3D-203ENST00000369747 TBKBP1A7MCY6 615 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 EFCAB14O75071 495 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 SYF2O95926 243 aaKnown RBP18.33■□□□□ 0.52
UBE3D-203ENST00000369747 AMHP03971 560 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 WEE2P0C1S8 567 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 PEX5P50542 639 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 LILRA4P59901 499 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 CENPCQ03188 943 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 DSC1Q08554 894 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 MYO1EQ12965 1108 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 ZNF667Q5HYK9 610 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 UBL4BQ8N7F7 174 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 RBBP8NLQ8NC74 664 aaPredicted RBP18.33■□□□□ 0.52
UBE3D-203ENST00000369747 CPA5Q8WXQ8 436 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 IFT81Q8WYA0 676 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.52
UBE3D-203ENST00000369747 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 MED4Q9NPJ6 270 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.52
UBE3D-203ENST00000369747 COL4A6Q14031 1691 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 PODXLO00592 558 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 HOXA2O43364 376 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 CFHP08603 1231 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 GNA15P30679 374 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 NNTQ13423 1086 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 FAM71BQ8TC56 605 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 UBE2Q2Q8WVN8 375 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 CYFIP2Q96F07 1278 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 AVENQ9NQS1 362 aaPredicted RBP18.32■□□□□ 0.52
UBE3D-203ENST00000369747 SNX9Q9Y5X1 595 aa18.32■□□□□ 0.52
UBE3D-203ENST00000369747 CHD7Q9P2D1 2997 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 AGPSO00116 658 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 FAM153BP0C7A2 387 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 RAP1GAPP47736 663 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 ZNF132P52740 706 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 CDH8P55286 799 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 DMTNQ08495 405 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 FAM153CQ494X1 144 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 COLGALT2Q8IYK4 626 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 AMACRQ9UHK6 382 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 KPNA7A9QM74 516 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 ITGB1P05556 798 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 CD58P19256 250 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 CTNNA2P26232 953 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 CTNNA1P35221 906 aaKnown RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 TAF6P49848 677 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 GYS2P54840 703 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 HSP90B2PQ58FF3 399 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 PSRC1Q6PGN9 363 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 MON1BQ7L1V2 547 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 HASPINQ8TF76 798 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 NAP1L3Q99457 506 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-203ENST00000369747 SDCBP2Q9H190 292 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
UBE3D-203ENST00000369747 B3GAT3O94766 335 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 MYBL1P10243 752 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 RRM1P23921 792 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 GGCXP38435 758 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 NSFP46459 744 aaKnown RBP18.3■□□□□ 0.52
UBE3D-203ENST00000369747 NOMO3P69849 1222 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 FAM193AP78312 1265 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 TRIM72Q6ZMU5 477 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 TRIM11Q96F44 468 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 ZNF560Q96MR9 790 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 FAM193BQ96PV7 902 aaPredicted RBP18.3■□□□□ 0.52
UBE3D-203ENST00000369747 BCO2Q9BYV7 579 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 FAN1Q9Y2M0 1017 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
UBE3D-203ENST00000369747 SPOPO43791 374 aa18.29■□□□□ 0.52
UBE3D-203ENST00000369747 ECHS1P30084 290 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms