RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 ZNF555Q8NEP9 628 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 RIN3Q8TB24 985 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 ZSCAN18Q8TBC5 510 aaPredicted RBP13.96□□□□□ -0.17
GOPC-202ENST00000368498 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 EFCAB1Q9HAE3 211 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 TAS2R14Q9NYV8 317 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 FAM8A1Q9UBU6 413 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 MSH4O15457 936 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 DCXO43602 365 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 WDR47O94967 919 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 MARCKSL1P49006 195 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 PSMD7P51665 324 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 SPP2Q13103 211 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 RRP1BQ14684 758 aaKnown RBP13.96□□□□□ -0.17
GOPC-202ENST00000368498 CD302Q8IX05 232 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 CASP10Q92851 521 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 PIF1Q9H611 641 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 TMA7Q9Y2S6 64 aaKnown RBP13.96□□□□□ -0.17
GOPC-202ENST00000368498 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
GOPC-202ENST00000368498 PIK3CDO00329 1044 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 POLBP06746 335 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 PDGFRBP09619 1106 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 FAM58BPP0C7Q3 252 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 GPSM2P81274 684 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 ELMO2Q96JJ3 720 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 APOL2Q9BQE5 337 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.18
GOPC-202ENST00000368498 ASPSCR1Q9BZE9 553 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 RSAD1Q9HA92 442 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 GPATCH2LQ9NWQ4 482 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.96□□□□□ -0.18
GOPC-202ENST00000368498 AFF4Q9UHB7 1163 aaKnown RBP13.96□□□□□ -0.18
GOPC-202ENST00000368498 BLOC1S6Q9UL45 172 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 AP4S1Q9Y587 144 aa13.96□□□□□ -0.18
GOPC-202ENST00000368498 ZNF189O75820 626 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 GJB6O95452 261 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 THRAP10827 490 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 SFNP31947 248 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 NRF1Q16656 503 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 ZC3H12BQ5HYM0 836 aaKnown RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 ARHGAP27Q6ZUM4 889 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 SLC35C1Q96A29 364 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CYP4F12Q9HCS2 524 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 A0A0A6YYK5 440 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 AP3B1O00203 1094 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 AHCYL1O43865 530 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 AVPR1AP37288 418 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 ELK3P41970 407 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CACNB2Q08289 660 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 MTMR2Q13614 643 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CCDC60Q8IWA6 550 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 SCN4BQ8IWT1 228 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 SNX19Q92543 992 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 FAM136AQ96C01 138 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 TRAPPC9Q96Q05 1148 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 HUS1O60921 280 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 NUMBP49757 651 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 PTK2BQ14289 1009 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 NEDD8Q15843 81 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CCNG2Q16589 344 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 CYP2R1Q6VVX0 501 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.95□□□□□ -0.18
GOPC-202ENST00000368498 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
GOPC-202ENST00000368498 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 WDR70Q9NW82 654 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 PDE4DIPQ5VU43 2346 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 E9PCH4 1651 aa13.95□□□□□ -0.18
GOPC-202ENST00000368498 WNT7AO00755 349 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 EIF3DO15371 548 aaKnown RBP eCLIP13.94□□□□□ -0.182e-9■□□□□ 8.9
GOPC-202ENST00000368498 RALBP11234 206 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 MRPS22P82650 360 aaKnown RBP13.94□□□□□ -0.18
GOPC-202ENST00000368498 SPON2Q9BUD6 331 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 BBS2Q9BXC9 721 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 PRR12Q9ULL5 1215 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 E5RI56 91 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 RGS5O15539 181 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 HNRNPRO43390 633 aaKnown RBP13.94□□□□□ -0.18
GOPC-202ENST00000368498 KCNQ2O43526 872 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 TBC1D4O60343 1298 aa13.94□□□□□ -0.18
GOPC-202ENST00000368498 GZMAP12544 262 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms