RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ADMP35318 185 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CCNFP41002 786 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 ETV3P41162 512 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 AFMP43652 599 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 DYNLL1P63167 89 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 ZBED6P86452 979 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 TFAP4Q01664 338 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 BFSP2Q13515 415 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 NONOQ15233 471 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 MEA1Q16626 185 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CERKLQ49MI3 558 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 SPECC1Q5M775 1068 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CDCP2Q5VXM1 449 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 RCSD1Q6JBY9 416 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CCDC70Q6NSX1 233 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 LETMD1Q6P1Q0 360 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 WDR93Q6P2C0 686 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 NFRKBQ6P4R8 1299 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 UNQ6494/PRO21346Q6UXR6 183 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 RBM23Q86U06 439 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CTAGE6Q86UF2 777 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CTAGE4Q8IX94 777 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 DBF4BQ8NFT6 615 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 SPPL3Q8TCT6 385 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 AFAP1L1Q8TED9 768 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 TMEM40Q8WWA1 233 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 GATA6Q92908 595 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 EXOC4Q96A65 974 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 RRP36Q96EU6 259 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 CALML4Q96GE6 196 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 MED15Q96RN5 788 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 ERGIC2Q96RQ1 377 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 TSPYL1Q9H0U9 437 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 RIC8AQ9NPQ8 531 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 RNF14Q9UBS8 474 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 SEC63Q9UGP8 760 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 PLAGL2Q9UPG8 496 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 EPN1Q9Y6I3 576 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 PLIN4Q96Q06 1357 aa7.05□□□□□ -1.28
ECHDC1-202ENST00000368289 A0A087X0B3 334 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 EIF3CLB5ME19 914 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 ITGB1P05556 798 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 PARP1P09874 1014 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 OR52Z1P0C646 297 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 GCFC2P16383 781 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 ATP2B1P20020 1258 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 MCM7P33993 719 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 KRT9P35527 623 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 GRIK1P39086 918 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 UBXN1Q04323 297 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 GABPAQ06546 454 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 TMEM266Q2M3C6 531 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 ASPRV1Q53RT3 343 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 ARSHQ5FYA8 562 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 FKBP15Q5T1M5 1219 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 C16orf86Q6ZW13 317 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 USP49Q70CQ1 688 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 NLRC3Q7RTR2 1065 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 NEK8Q86SG6 692 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 FBXO16Q8IX29 292 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 WDR24Q96S15 920 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 EIF3CQ99613 913 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 TM9SF2Q99805 663 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 APOL5Q9BWW9 433 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 PARD6BQ9BYG5 372 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 AP5M1Q9H0R1 490 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 LUC7LQ9NQ29 371 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 EXOC1Q9NV70 894 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 ZNF446Q9NWS9 450 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 CWC15Q9P013 229 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 SWAP70Q9UH65 585 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 MAD2L2Q9UI95 211 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 TPX2Q9ULW0 747 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 PPT2Q9UMR5 302 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 PCDHA6Q9UN73 950 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 Q9Y3F1 56 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 PCDHA8Q9Y5H6 950 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 FBN2P35556 2912 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 APC2O95996 2303 aa7.04□□□□□ -1.28
ECHDC1-202ENST00000368289 MGAQ8IWI9 3026 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 FAM170BA6NMN3 283 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 TEX33O43247 280 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 NDUFA10O95299 355 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 GNA14O95837 355 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 TOP3BO95985 862 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 RB1P06400 928 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 MYL3P08590 195 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 NME1P15531 152 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 PRCPP42785 496 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms