RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CCDC85BQ15834 202 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 XRRA1Q6P2D8 792 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 UNKQ9C0B0 810 aaKnown RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ARIH2O95376 493 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 CTCFP49711 727 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SEMA6BQ9H3T3 888 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 C5orf58C9J3I9 102 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 AIM2O14862 343 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 HERVK_113P62684 666 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 FAM131BQ86XD5 332 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ATP6V0D2Q8N8Y2 350 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 TEX12Q9BXU0 123 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 UBP1Q9NZI7 540 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SLC25A13Q9UJS0 675 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SNX5Q9Y5X3 404 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 TARSL2A2RTX5 802 aaKnown RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PSMD3O43242 534 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SHMT1P34896 483 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PTPN7P35236 360 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PGM1P36871 562 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SYDE1Q6ZW31 735 aaPredicted RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 CEP41Q9BYV8 373 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 MROH8Q9H579 483 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 TBKBP1A7MCY6 615 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 PJA2O43164 708 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 MYL4P12829 197 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RAD23BP54727 409 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 LVRNQ6Q4G3 990 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 FAM172AQ8WUF8 416 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CNTNAP2Q9UHC6 1331 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 F5H5T6 163 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 WNT10BO00744 389 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 FGFR2P21802 821 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 FLOT2Q14254 428 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 MFSD4BQ5TF39 518 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 TAS1R2Q8TE23 839 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 EDEM1Q92611 657 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RFX3P48380 749 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 DDX39BQ13838 428 aaKnown RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 PTPAQ15257 358 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 B4GALNT2Q8NHY0 566 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 NMRK2Q9NPI5 230 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 AAASQ9NRG9 546 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 IL17RBQ9NRM6 502 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 AGRPO00253 132 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 ZBTB39O15060 712 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CCDC22O60826 627 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 THP07101 528 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 INSRRP14616 1297 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CPA2P48052 419 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 SLC11A2P49281 568 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CYTH1Q15438 398 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 NOA1Q8NC60 698 aaKnown RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 DDI1Q8WTU0 396 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 BRD8Q9H0E9 1235 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CHCHD3Q9NX63 227 aaKnown RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
PTPRK-207ENST00000368226 A0A087X0T9 212 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 FAM228BP0C875 321 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 GHRP10912 638 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 RALBP11234 206 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 ERVK-24P63145 666 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 BEX3Q00994 111 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 CNTN2Q02246 1040 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 TPCN2Q8NHX9 752 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 ABHD8Q96I13 439 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 MKNK1Q9BUB5 465 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 TRAF3IP3Q9Y228 551 aa13.42□□□□□ -0.26
PTPRK-207ENST00000368226 GRIK4Q16099 956 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 RDM1Q8NG50 284 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 CDCA5Q96FF9 252 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 PNKPQ96T60 521 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.41□□□□□ -0.26
PTPRK-207ENST00000368226 H3BRB1 525 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 ATP5HO75947 161 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 HIC1Q14526 733 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 CHI3L2Q15782 390 aa13.41□□□□□ -0.26
PTPRK-207ENST00000368226 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms