RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CCINQ13939 588 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DCAF6Q58WW2 860 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ITPRIPL1Q6GPH6 555 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ERAP2Q6P179 960 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DGKHQ86XP1 1220 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 SDR42E1Q8WUS8 393 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 EPAS1Q99814 870 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TRAF3IP3Q9Y228 551 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 UTYO14607 1347 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 H2AFYO75367 372 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TOM1L1O75674 476 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DARSP14868 501 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PSMC2P35998 433 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 FAM46CQ5VWP2 391 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 NAA35Q5VZE5 725 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 IQSEC1Q6DN90 963 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TAS2R42Q7RTR8 314 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DNAJB7Q7Z6W7 309 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CATSPER3Q86XQ3 398 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 NAF1Q96HR8 494 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CNBD2Q96M20 576 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF285Q96NJ3 590 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 OMDQ99983 421 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CYP4F11Q9HBI6 524 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TBK1Q9UHD2 729 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 MYOM1P52179 1685 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PGRMC1O00264 195 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PPP6R2O75170 966 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 S100A6P06703 90 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 SLC2A4P14672 509 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 RXRAP19793 462 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 MKRN4PQ13434 485 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF699Q32M78 642 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 RABEPKQ7Z6M1 372 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ATP6V0D2Q8N8Y2 350 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ATP8B4Q8TF62 1192 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 APBB2Q92870 758 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 MTMR9Q96QG7 549 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ZCCHC2Q9C0B9 1178 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 FAM96AQ9H5X1 160 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 SH3GLB1Q9Y371 365 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 C1QTNF3-AMACRE9PGA6 284 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 F5H6K3 240 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 MYO1FO00160 1098 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 PRPF4O43172 522 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 TPPPO94811 219 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 DR1Q01658 176 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 KLRC3Q07444 240 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 NFIAQ12857 509 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RGS9BPQ6ZS82 235 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 CD302Q8IX05 232 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RMDN1Q96DB5 314 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 FAM20AQ96MK3 541 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 PPARGC1AQ9UBK2 798 aaKnown RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 MINPP1Q9UNW1 487 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 A0A0G2JPF8 293 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 HNRNPCL3B7ZW38 293 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 HNRNPCL4P0DMR1 293 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 DNAJB2P25686 324 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 QARSP47897 775 aaKnown RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF177Q13360 481 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 UAP1L1Q3KQV9 507 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 HMBOX1Q6NT76 420 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RFX6Q8HWS3 928 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 FANCBQ8NB91 859 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 INPP5DQ92835 1189 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 CD248Q9HCU0 757 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SYBUQ9NX95 663 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 CDV3Q9UKY7 258 aaKnown RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ALG6Q9Y672 507 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 IQSEC2Q5JU85 1478 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 H3BM21 787 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RASGRP1O95267 797 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 PRKAR2AP13861 404 aaKnown RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 AMD1P17707 334 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 LBX1P52954 281 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 NDUFA5Q16718 116 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 AASDHQ4L235 1098 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RARS2Q5T160 578 aaKnown RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 IZUMO3Q5VZ72 239 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 TXNDC11Q6PKC3 985 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 RRM2BQ7LG56 351 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF280BQ86YH2 543 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ACDQ96AP0 544 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 BHMT2Q9H2M3 363 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 HIPK3Q9H422 1215 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 KCTD5Q9NXV2 234 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 TBC1D7Q9P0N9 293 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SUSD2Q9UGT4 822 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ZBTB5O15062 677 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 MOCS2O96007 188 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms