RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 AGPSO00116 658 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DNALI1O14645 258 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ABHD2P08910 425 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SDC4P31431 198 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SCTRP47872 440 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PDE1BQ01064 536 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC14Q15048 493 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TFDP3Q5H9I0 405 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC38Q5VT99 294 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 EPS8L1Q8TE68 723 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HDAC11Q96DB2 347 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MRPL40Q9NQ50 206 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PCDHA2Q9Y5H9 948 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 FSCN2O14926 492 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TGFB3P10600 412 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RALAP11233 206 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RPL21P46778 160 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ST13P50502 369 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 GEMIN4P57678 1058 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TGFB2P61812 414 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PPATQ06203 517 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIM16LQ309B1 348 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 KATNAL2Q8IYT4 538 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RFWD2Q8NHY2 731 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 NLRP4Q96MN2 994 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MED10Q9BTT4 135 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 WDR18Q9BV38 432 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PRDM16Q9HAZ2 1276 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYP3A43Q9HB55 503 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC38A10Q9HBR0 1119 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC4Q9HBW1 653 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 POLE3Q9NRF9 147 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 IPO11Q9UI26 975 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RGPD5Q99666 1765 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 KLRG2A4D1S0 409 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 KPNA7A9QM74 516 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 NBNO60934 754 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ATP5BP06576 529 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 BACE1P56817 501 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ABRAQ8N0Z2 381 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 SHC3Q92529 594 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZBED2Q9BTP6 218 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DCLK3Q9C098 648 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 KLHL25Q9H0H3 589 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 WWP1Q9H0M0 922 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DNAJC17Q9NVM6 304 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DRG1Q9Y295 367 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ITGA4P13612 1032 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DSG3P32926 999 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 VHLP40337 213 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 RBP5P82980 135 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 SFSWAPQ12872 951 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF394Q53GI3 561 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 FSCBQ5H9T9 825 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DPY19L2Q6NUT2 758 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMC5Q6UXY8 1006 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 RINLQ6ZS11 566 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 CCNJLQ8IV13 435 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TAS1R2Q8TE23 839 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ART4Q93070 314 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 CACYBPQ9HB71 228 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DDX20Q9UHI6 824 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARHGAP26Q9UNA1 814 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 COPG1Q9Y678 874 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACADSP16219 412 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TCEAL1Q15170 157 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TBCCQ15814 346 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 EPC2Q52LR7 807 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 FASTKD5Q7L8L6 764 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 MARF1Q9Y4F3 1742 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 EIF4BP23588 611 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACADSBP45954 432 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 KCNJ1P48048 391 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF200P98182 395 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 BSPRYQ5W0U4 402 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC47A2Q86VL8 602 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC57Q8N9N7 239 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 OPTNQ96CV9 577 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIM62Q9BVG3 475 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 CCDC90BQ9GZT6 254 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DNAJC18Q9H819 358 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 PCDH9Q9HC56 1237 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 APOL1O14791 398 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TM9SF1O15321 606 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ANP32DO95626 131 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 RARAP10276 462 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 BCAR1P56945 870 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 PPP3CAQ08209 521 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARL13BQ3SXY8 428 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ERMARDQ5T6L9 678 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 PACS2Q86VP3 889 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DTX3LQ8TDB6 740 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 AHDC1Q5TGY3 1603 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TJP1Q07157 1748 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 IGLV3-22A0A075B6J6 115 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 M0QYV0 167 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 OPLAHO14841 1288 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 VDRP11473 427 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 GJA8P48165 433 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms