RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 FKBP10Q96AY3 582 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 MOGAT1Q96PD6 335 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 MESP1Q9BRJ9 268 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 PTDSS2Q9BVG9 487 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZNHIT2Q9UHR6 403 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 SERTAD3Q9UJW9 196 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 SSX2IPQ9Y2D8 614 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 TBC1D30Q9Y2I9 924 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 MRPS17Q9Y2R5 130 aaKnown RBP3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 PCDHGB6Q9Y5F9 930 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 TRIM43BA6NCK2 446 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZAR1LA6NP61 321 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 LINC00473A8K010 186 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ISM1B1AKI9 464 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SUV39H1O43463 412 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MARCH6O60337 910 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ERBB2P04626 1255 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MYF5P13349 255 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 PEX2P28328 305 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 PPIFP30405 207 aaKnown RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 GRIA3P42263 894 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 FAM193AP78312 1265 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 FMO1Q01740 532 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SEMA5AQ13591 1074 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 RAB32Q13637 225 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 POLD3Q15054 466 aaPredicted RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 TBCCQ15814 346 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 CNGA2Q16280 664 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SMN1Q16637 294 aaKnown RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ERCC6LQ2NKX8 1250 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 NBPF8Q3BBV2 869 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 PLA1AQ53H76 456 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 C3orf38Q5JPI3 329 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 DCAF12L1Q5VU92 463 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 RGS7BPQ6MZT1 257 aaPredicted RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MAVSQ7Z434 540 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MICU3Q86XE3 530 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 GAS2L3Q86XJ1 694 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 OR56A3Q8NH54 315 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 RAPGEF4Q8WZA2 1011 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 TRIM43Q96BQ3 446 aaPredicted RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZG16BQ96DA0 208 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 APIPQ96GX9 242 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SUCLG2Q96I99 432 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 NELL2Q99435 816 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZNF518BQ9C0D4 1074 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MS4A7Q9GZW8 240 aaPredicted RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 RIOX1Q9H6W3 641 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 CXorf36Q9H7Y0 433 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 IL17RBQ9NRM6 502 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SACM1LQ9NTJ5 587 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 TLK1Q9UKI8 766 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 NDRG4Q9ULP0 352 aaKnown RBP3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 ST3GAL5Q9UNP4 418 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 SHOC2Q9UQ13 582 aa3.98□□□□□ -1.77
RNU4-48P-201ENST00000365559 MAP4K4O95819 1239 aaPredicted RBP3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 NR2F6P10588 404 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 CYP2C9P11712 490 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 PCSK6P29122 969 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 WNT3P56703 355 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 MYO1EQ12965 1108 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 SFRP4Q6FHJ7 346 aaPredicted RBP3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZDHHC24Q6UX98 284 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 SESTD1Q86VW0 696 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 CAGE1Q8TC20 777 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 ATG4AQ8WYN0 398 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 PBKQ96KB5 322 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 C8orf48Q96LL4 319 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 DUSP26Q9BV47 211 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 ALG8Q9BVK2 526 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 APOL5Q9BWW9 433 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 LRRC27Q9C0I9 530 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 R3HDMLQ9H3Y0 253 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 KIAA1586Q9HCI6 787 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 COL20A1Q9P218 1284 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 AFF4Q9UHB7 1163 aaKnown RBP3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 INSL6Q9Y581 213 aa3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 COL11A2P13942 1736 aaPredicted RBP3.97□□□□□ -1.77
RNU4-48P-201ENST00000365559 CCDC151A5D8V7 595 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 MGEA5O60502 916 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 URI1O94763 535 aaPredicted RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 CSF1RP07333 972 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 XRCC6P12956 609 aaKnown RBP eCLIP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 JUPP14923 745 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 ZFXP17010 805 aaPredicted RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 ZKSCAN1P17029 563 aaPredicted RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 KCNA3P22001 575 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 LRPAP1P30533 357 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 LIPAP38571 399 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 CLCN2P51788 898 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 DGKEP52429 567 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 CACNA2D1P54289 1103 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 NANOS3P60323 173 aaKnown RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 RPS16P62249 146 aaKnown RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 KRT17Q04695 432 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 E2F2Q14209 437 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 STRIP1Q5VSL9 837 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 DTX2Q86UW9 622 aa3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 FAM98AQ8NCA5 519 aaKnown RBP3.96□□□□□ -1.78
RNU4-48P-201ENST00000365559 NMD3Q96D46 503 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms