RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 KIAA1468Q9P260 1216 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 STK39Q9UEW8 545 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 AFF4Q9UHB7 1163 aaKnown RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 CHORDC1Q9UHD1 332 aaPredicted RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 NUDT5Q9UKK9 219 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 GTF3C4Q9UKN8 822 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 FBXO4Q9UKT5 387 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 KCNH3Q9ULD8 1083 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 TBX20Q9UMR3 447 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 PCDHB8Q9UN66 801 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 AGAP1Q9UPQ3 857 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC8A2Q9UPR5 921 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 MRPS17Q9Y2R5 130 aaKnown RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 YIPF1Q9Y548 306 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 PPME1Q9Y570 386 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 PCDHGA2Q9Y5H1 932 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 BACE2Q9Y5Z0 518 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 CLIC4Q9Y696 253 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 WNT6Q9Y6F9 365 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZFP37Q9Y6Q3 630 aaPredicted RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 MORC2Q9Y6X9 1032 aaPredicted RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 V9GYY5 206 aaPredicted RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 DOCK8Q8NF50 2099 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 ATG2BQ96BY7 2078 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 CFAP47Q6ZTR5 3102 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 CEP250Q9BV73 2442 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 KIAA1671Q9BY89 1806 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 ATXN2Q99700 1313 aaKnown RBP1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 STK36Q9NRP7 1315 aa1.66□□□□□ -2.14
RNU1-42P-201ENST00000364033 DNAH14Q0VDD8 3507 aa1.65□□□□□ -2.14
RNU1-42P-201ENST00000364033 MYH9P35579 1960 aaKnown RBP1.65□□□□□ -2.14
RNU1-42P-201ENST00000364033 PLXNA3P51805 1871 aa1.65□□□□□ -2.14
RNU1-42P-201ENST00000364033 NID2Q14112 1375 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 F5P12259 2224 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 GON4LQ3T8J9 2241 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 A0A0B4J269 797 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 TTC26A0AVF1 554 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 FAM170AA1A519 330 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CARNS1A5YM72 827 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 C2orf78A6NCI8 922 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 MYMKA6NI61 221 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 OR6C75A6NL08 312 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 A6NNZ2 444 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KPNA7A9QM74 516 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 PRR5-ARHGAP8B1AHC4 643 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 WASH3PC4AMC7 463 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 TMEM189-UBE2V1I3L0A0 370 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 K7EQS6 105 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 M0QZQ0 153 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ARNTLO00327 626 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 PIRO00625 290 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KCNK3O14649 394 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 SLC30A4O14863 429 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 IKBKBO14920 756 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 SYN3O14994 580 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KHNYNO15037 678 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CLIC2O15247 247 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 OGTO15294 1046 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CHADO15335 359 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HYAL3O43820 417 aaPredicted RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CUTAO60888 179 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 RPP40O75818 363 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ZNF202O95125 648 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 OAZ2O95190 189 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KIF20AO95235 890 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KCNK5O95279 499 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 SLU7O95391 586 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 GCNT3O95395 438 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KLF8O95600 359 aaPredicted RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 TBX18O95935 607 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 BMP15O95972 392 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 F11P03951 625 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ITGB3P05106 788 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HMBSP08397 361 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ADRB1P08588 477 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CLTAP09496 248 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 MAPTP10636 758 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 IRF1P10914 325 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HAPLN1P10915 354 aaPredicted RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 TDGF1P13385 188 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 KRT10P13645 584 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 IDEP14735 1019 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HNRNPLP14866 589 aaKnown RBP eCLIP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HMGA1P17096 107 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ATF6P18850 670 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HDCP19113 662 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 PROZP22891 400 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 BDNFP23560 247 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 MCM3P25205 808 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 ERCC5P28715 1186 aaPredicted RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 LRPAP1P30533 357 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 POLR2BP30876 1174 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 HOXA9P31269 272 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CASQ1P31415 396 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 CTHP32929 405 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 RPL9P32969 192 aaKnown RBP1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 GJA4P35212 333 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 AVPR1AP37288 418 aa1.65□□□□□ -2.15
RNU1-42P-201ENST00000364033 GRIK1P39086 918 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms