RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZNF554Q86TJ5 538 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 RBAKQ9NYW8 714 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 WDR35Q9P2L0 1181 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 A0A087X0T9 212 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 UBXN8O00124 270 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 FAM228BP0C875 321 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 MAPK11Q15759 364 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TCHHL1Q5QJ38 904 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TMEM47Q9BQJ4 181 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 V9GYQ6 96 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 RIPK2O43353 540 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TLR2O60603 784 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 COG2Q14746 738 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 BDH2Q9BUT1 245 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TAB1Q15750 504 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 KLHDC7AQ5VTJ3 777 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 NET1Q7Z628 596 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 RPL26L1Q9UNX3 145 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SLC16A4O15374 487 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TSC22D2O75157 780 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 RHOBTB1O94844 696 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 IMPDH2P12268 514 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 DGUOKQ16854 277 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 C11orf63Q6NUN7 778 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 C17orf50Q8WW18 174 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 RSL24D1Q9UHA3 163 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 HPS5Q9UPZ3 1129 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 STARD13Q9Y3M8 1113 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 GMEB1Q9Y692 573 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 LSM1O15116 133 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 NCF4Q15080 339 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 FHDC1Q9C0D6 1143 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 WFS1O76024 890 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 SLC45A4Q5BKX6 768 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CWF19L1Q69YN2 538 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 DLG3Q92796 817 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CCDC126Q96EE4 140 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PAFAH2Q99487 392 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TIPINQ9BVW5 301 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TBC1D22BQ9NU19 505 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 S100A1P23297 94 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 GRK2P25098 689 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 SFNP31947 248 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 IL6STP40189 918 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CCNHP51946 323 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PSMC6P62333 389 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 RRM2BQ7LG56 351 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 IGDCC4Q8TDY8 1250 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ECSITQ9BQ95 431 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ARHGEF38Q9NXL2 777 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM13O60858 407 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 GLRA3O75311 464 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 GCLCP48506 637 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 GPC3P51654 580 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 KCTD21Q4G0X4 260 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ERMARDQ5T6L9 678 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ARMC3Q5W041 872 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CLVS1Q8IUQ0 354 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 NLRP4Q96MN2 994 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 RPAP3Q9H6T3 665 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CTNNAL1Q9UBT7 734 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 IPPQ9Y573 584 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 SYNDIG1LA6NDD5 238 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 DUOXA2Q1HG44 320 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 NT5DC1Q5TFE4 455 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 EZH1Q92800 747 aaPredicted RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PI4KBQ9UBF8 816 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 HPSEQ9Y251 543 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TPD52L2O43399 206 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 EYA4O95677 639 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 FAM153BP0C7A2 387 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TNFAIP2Q03169 654 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms