RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 NRSN1Q8IZ57 195 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.79
CHD3-202ENST00000358181 MASTLQ96GX5 879 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 TMEM169Q96HH4 297 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 MPP4Q96JB8 637 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 PRPF18Q99633 342 aaKnown RBP10.15□□□□□ -0.79
CHD3-202ENST00000358181 BFARQ9NZS9 450 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 PLAAQ9Y263 795 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 DCDC2CA8MYV0 355 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 B2RBV5 119 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 IFRD1O00458 451 aaPredicted RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 PRELPP51888 382 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 GLB1LQ6UWU2 654 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 AGMOQ6ZNB7 445 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 THAP11Q96EK4 314 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 KATNAL1Q9BW62 490 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 TRPM5Q9NZQ8 1165 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 DCDC2Q9UHG0 476 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 FEM1BQ9UK73 627 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CALB1P05937 261 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CKMP06732 381 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MMEP08473 750 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CYP20A1Q6UW02 462 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 COLGALT2Q8IYK4 626 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CENPLQ8N0S6 344 aaPredicted RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 RPH3AQ9Y2J0 694 aaPredicted RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 TSC22D4Q9Y3Q8 395 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 FAM25EA8MYX2 175 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 VWA5AO00534 786 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 PSEN2P49810 448 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 EPS8Q12929 822 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 ANO5Q75V66 913 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RDM1Q8NG50 284 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RNF112Q9ULX5 631 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 TRIM49BA6NDI0 452 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 TSPAN3O60637 253 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CIAO1O76071 339 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MMP1P03956 469 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CHGBP05060 677 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 UBA1P22314 1058 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 HMGCS2P54868 508 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 EIF3EP60228 445 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 MMRN1Q13201 1228 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MTM1Q13496 603 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CNGA3Q16281 694 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RARS2Q5T160 578 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 PARGQ86W56 976 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CLEC10AQ8IUN9 316 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 NEK9Q8TD19 979 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MTFMTQ96DP5 389 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RBAKQ9NYW8 714 aaPredicted RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHD3-202ENST00000358181 EHD2Q9NZN4 543 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RIMKLBQ9ULI2 386 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 EFR3BQ9Y2G0 817 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 BLMP54132 1417 aaPredicted RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 AIM2O14862 343 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 ZBTB39O15060 712 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 AKT2P31751 481 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MTMR2Q13614 643 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 C1orf54Q8WWF1 131 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 THG1LQ9NWX6 298 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 MINPP1Q9UNW1 487 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 USP6P35125 1406 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 HAUS5O94927 633 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MYBPC1Q00872 1141 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 KLHL38Q2WGJ6 581 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 GSPT2Q8IYD1 628 aaKnown RBP10.14□□□□□ -0.79
CHD3-202ENST00000358181 C19orf18Q8NEA5 215 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 COL26A1Q96A83 441 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 RNFT2Q96EX2 444 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 PBKQ96KB5 322 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 C2orf40Q9H1Z8 148 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 AASDHPPTQ9NRN7 309 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 DNAJC11Q9NVH1 559 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 LNPEPQ9UIQ6 1025 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CHKBQ9Y259 395 aa10.14□□□□□ -0.79
CHD3-202ENST00000358181 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 KCNK10P57789 538 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 GFPT1Q06210 699 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 PUDPQ08623 228 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 TFDP2Q14188 446 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 SUZ12Q15022 739 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 FAM124AQ86V42 546 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 CDK20Q8IZL9 346 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 UBA3Q8TBC4 463 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 SCFD2Q8WU76 684 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 CDYLQ9Y232 598 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ZNF682O95780 498 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 CSF1RP07333 972 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms