RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CDK8P49336 464 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 HARS2P49590 506 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PTCD2Q8WV60 388 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SCN3BQ9NY72 215 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 EXTL3O43909 919 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TRMUO75648 421 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 UMPSP11172 480 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TFDP1Q14186 410 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TBC1D21Q8IYX1 336 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 AMER2Q8N7J2 671 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DYDC2Q96IM9 177 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GRIN2DO15399 1336 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CRHR1P34998 444 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PTK2BQ14289 1009 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 INTS11Q5TA45 600 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGEF19Q8IW93 802 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PNPLA3Q9NST1 481 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SNX5Q9Y5X3 404 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF804BA4D1E1 1349 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 RECQL5O94762 991 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PTPN7P35236 360 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 VPS72Q15906 364 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PTCD3Q96EY7 689 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD65E5RJM6 399 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 BCL10O95999 233 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SOX6P35712 828 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 KLRC3Q07444 240 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 BNIP2Q12982 314 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GRTP1Q5TC63 336 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 DHDDSQ86SQ9 333 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TTC30BQ8N4P2 665 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 LPAR1Q92633 364 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HOPXQ9BPY8 73 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TEX12Q9BXU0 123 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MRPL4Q9BYD3 311 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GARTP22102 1010 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PRELPP51888 382 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MXD4Q14582 209 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ITPRIPL1Q6GPH6 555 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MTDHQ86UE4 582 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 RRN3Q9NYV6 651 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 M0R3G1 203 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ERO1BQ86YB8 467 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HELQQ8TDG4 1101 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TNFRSF25Q93038 417 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PIH1D3Q9NQM4 214 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 IL18RAPO95256 599 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MYL2P10916 166 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TMED2Q15363 201 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CERKLQ49MI3 558 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 C16orf86Q6ZW13 317 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CDR2LQ86X02 465 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 POMGNT1Q8WZA1 660 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TNNC2P02585 160 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ZDHHC17Q8IUH5 632 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 NYAP2Q9P242 653 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 A6NJR5 290 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HACD1B0YJ81 288 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TUBA1BP68363 451 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PRKAA1Q13131 559 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GJC2Q5T442 439 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 BNC2Q6ZN30 1099 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TUBA1AQ71U36 451 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MYL10Q9BUA6 226 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 OPLAHO14841 1288 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SULT2A1Q06520 285 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ERCC6L2Q5T890 1561 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 KIAA0895Q8NCT3 520 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TSPAN14Q8NG11 270 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SEPT1Q8WYJ6 367 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 KAT2BQ92831 832 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 VAT1Q99536 393 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 COA1Q9GZY4 146 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CCNB1IP1Q9NPC3 277 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TBK1Q9UHD2 729 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 DTNAQ9Y4J8 743 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TARSP26639 723 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TYK2P29597 1187 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 VCPP55072 806 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 IFI35P80217 286 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HERC3Q15034 1050 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 LONRF1Q17RB8 773 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TIFABQ6ZNK6 161 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 NIPA2Q8N8Q9 360 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 RDH12Q96NR8 316 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC4Q9HBW1 653 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 LYPLA2O95372 231 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PDCD6IPQ8WUM4 868 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SH2D3AQ9BRG2 576 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 UNKQ9C0B0 810 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ZC3H7BQ9UGR2 993 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 RBP1P09455 135 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms