RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 CLDND1Q9NY35 253 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 HMGXB4Q9UGU5 601 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ASB3Q9Y575 518 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 NME7Q9Y5B8 376 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 FHOD1Q9Y613 1164 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 PRUNE2Q8WUY3 3088 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 F8VZ95 297 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 TRIM66O15016 1216 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 XYLBO75191 536 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 KRT5P13647 590 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ALDH1A3P47895 512 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SLC8A3P57103 927 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 POLR2FP61218 127 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ARHGAP44Q17R89 818 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 PPM1LQ5SGD2 360 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 FAM71AQ8IYT1 594 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SLC7A14Q8TBB6 771 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 KAT5Q92993 513 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 NUCKS1Q9H1E3 243 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 PNPLA8Q9NP80 782 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 EHD2Q9NZN4 543 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.311e-9■□□□□ 8.9
FDPS-201ENST00000356657 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
FDPS-201ENST00000356657 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 MED7O43513 233 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 ATP2C2O75185 946 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 LRG1P02750 347 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 HAPLN1P10915 354 aaPredicted RBP16.98■□□□□ 0.31
FDPS-201ENST00000356657 GTF2F1P35269 517 aaKnown RBP eCLIP16.98■□□□□ 0.313e-8■■■□□ 17.1
FDPS-201ENST00000356657 JAM2P57087 298 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 PTK2Q05397 1052 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 DUSP4Q13115 394 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
FDPS-201ENST00000356657 VEPH1Q14D04 833 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 ZNF394Q53GI3 561 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 LLGL2Q6P1M3 1020 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 EP400NLQ6ZTU2 488 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 ITIH5Q86UX2 942 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 ATAD1Q8NBU5 361 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 LEMD2Q8NC56 503 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 VN1R2Q8NFZ6 395 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 HLA-CQ95604 372 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 CYFIP2Q96F07 1278 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 PGLYRP2Q96PD5 576 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 UBE2ZQ9H832 354 aaPredicted RBP16.98■□□□□ 0.31
FDPS-201ENST00000356657 TMLHEQ9NVH6 421 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 YIPF1Q9Y548 306 aa16.98■□□□□ 0.31
FDPS-201ENST00000356657 REV3LO60673 3130 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 HCRTO43612 131 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 VNN2O95498 520 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 FAM200BP0CF97 657 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 STAT1P42224 750 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 EPHB3P54753 998 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 CES5AQ6NT32 575 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 GJB7Q6PEY0 223 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 FAM35AQ86V20 835 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 FUKQ8N0W3 1084 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 ZNF397Q8NF99 534 aaPredicted RBP16.97■□□□□ 0.31
FDPS-201ENST00000356657 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 MSLNLQ96KJ4 702 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 C8orf48Q96LL4 319 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 PRKD2Q9BZL6 878 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
FDPS-201ENST00000356657 HESX1Q9UBX0 185 aa16.97■□□□□ 0.31
FDPS-201ENST00000356657 PATJQ8NI35 1801 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 TBX10O75333 385 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 SEC24AO95486 1093 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 TPM1P09493 284 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 CD19P15391 556 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 ANXA13P27216 316 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 GNA15P30679 374 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 USP8P40818 1118 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 KLK7P49862 253 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 APBA1Q02410 837 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 CNGA2Q16280 664 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 PUS10Q3MIT2 529 aaKnown RBP16.96■□□□□ 0.31
FDPS-201ENST00000356657 ZNF677Q86XU0 584 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 SLC2A14Q8TDB8 520 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 SPATA17Q96L03 361 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 NECTIN4Q96NY8 510 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
FDPS-201ENST00000356657 MED10Q9BTT4 135 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 GPR88Q9GZN0 384 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 ADAM7Q9H2U9 754 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 CSNK1G1Q9HCP0 422 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 CLEC1BQ9P126 229 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms