RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PCYT1AP49585 367 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 PDE1CQ14123 709 aaPredicted RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 C11orf63Q6NUN7 778 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 CAPN12Q6ZSI9 719 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 SLC43A3Q8NBI5 491 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 C9orf72Q96LT7 481 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 HAUS8Q9BT25 410 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 CENPOQ9BU64 300 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 VPS11Q9H270 941 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 TMA7Q9Y2S6 64 aaKnown RBP16.47■□□□□ 0.23
RTN3-205ENST00000356000 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
RTN3-205ENST00000356000 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 CCNT2O60583 730 aaKnown RBP16.46■□□□□ 0.23
RTN3-205ENST00000356000 MYL2P10916 166 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 PRDX6P30041 224 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 LRP8Q14114 963 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 HIC1Q14526 733 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 PCYOX1LQ8NBM8 494 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 RASGRP4Q8TDF6 673 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 CALML4Q96GE6 196 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 MAELQ96JY0 434 aaKnown RBP16.46■□□□□ 0.23
RTN3-205ENST00000356000 ANAPC5Q9UJX4 755 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 POLIQ9UNA4 740 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 AP4B1Q9Y6B7 739 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 C10orf71Q711Q0 1435 aa16.46■□□□□ 0.23
RTN3-205ENST00000356000 WDR91A4D1P6 747 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 NOTOA8MTQ0 251 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 TTC34A8MYJ7 566 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 ESRRBO95718 433 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 MZF1P28698 734 aaPredicted RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 MXI1P50539 228 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 PTK6Q13882 451 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 ITPRIPL1Q6GPH6 555 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 OGFOD2Q6N063 350 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 AMIGO2Q86SJ2 522 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 SHKBP1Q8TBC3 707 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 TMIGD2Q96BF3 282 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 ZSCAN10Q96SZ4 725 aaPredicted RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 DNAJC18Q9H819 358 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 ARMT1Q9H993 441 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 PALMDQ9NP74 551 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 STK17AQ9UEE5 414 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 GNPTGQ9UJJ9 305 aa16.46■□□□□ 0.22
RTN3-205ENST00000356000 FBXO9Q9UK97 447 aaPredicted RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 AJAP1Q9UKB5 411 aaPredicted RBP16.46■□□□□ 0.22
RTN3-205ENST00000356000 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 C2orf71A6NGG8 1288 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 KCNA2P16389 499 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 TCEA1P23193 301 aaKnown RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 CIITAP33076 1130 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 ALDH1A3P47895 512 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 KDSRQ06136 332 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 ATP1A4Q13733 1029 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 GK3PQ14409 553 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 RNF207Q6ZRF8 634 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 SYDE1Q6ZW31 735 aaPredicted RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 MIER3Q7Z3K6 550 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 IFNLR1Q8IU57 520 aaPredicted RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 CNBD2Q96M20 576 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 ERVK-11Q9UQG0 969 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 H3BNX3 289 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 DDAH1O94760 285 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 INHBBP09529 407 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 RAG1P15918 1043 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 CPOXP36551 454 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 IGBP1P78318 339 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 CNGA3Q16281 694 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 GLYCTKQ8IVS8 523 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 ZC3H3Q8IXZ2 948 aaKnown RBP16.45■□□□□ 0.22
RTN3-205ENST00000356000 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
RTN3-205ENST00000356000 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 A0A1W2PPM1 405 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 PRKAB2O43741 272 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 SERPINB6P35237 376 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 TGFB2P61812 414 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 GRB10Q13322 594 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 HERC4Q5GLZ8 1057 aaPredicted RBP16.44■□□□□ 0.22
RTN3-205ENST00000356000 EGFLAMQ63HQ2 1017 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 NOP9Q86U38 636 aaKnown RBP16.44■□□□□ 0.22
RTN3-205ENST00000356000 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 CFAP57Q96MR6 1250 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 THAP2Q9H0W7 228 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 CDH7Q9ULB5 785 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 SIN3BO75182 1162 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 PARNO95453 639 aaKnown RBP16.44■□□□□ 0.22
RTN3-205ENST00000356000 IL1BP01584 269 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 SF3B4Q15427 424 aaKnown RBP eCLIP16.44■□□□□ 0.22
RTN3-205ENST00000356000 EDRF1Q3B7T1 1238 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms