RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HMGCRP04035 888 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ITGB3P05106 788 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ARHGAP1Q07960 439 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 XYLT1Q86Y38 959 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 TDRPQ86YL5 185 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 GLIS1Q8NBF1 620 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 EFCC1Q9HA90 598 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 GLTPD2A6NH11 291 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 SGK1O00141 431 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ALOX15BO15296 676 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ZSCAN5DPP0CG00 497 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 VDRP11473 427 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 KDELR1P24390 212 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 IGBP1P78318 339 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 AMHR2Q16671 573 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 CCDC142Q17RM4 750 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 RNASEH2BQ5TBB1 312 aaKnown RBP23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 PPP1R21Q6ZMI0 780 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 BBS12Q6ZW61 710 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 CENPUQ71F23 418 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ARMCX2Q7L311 632 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 JOSD2Q8TAC2 188 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 CKAP2Q8WWK9 683 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 CPXM1Q96SM3 734 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 ELAC2Q9BQ52 826 aaKnown RBP23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 PHACTR1Q9C0D0 580 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 SDCBP2Q9H190 292 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 EURLQ9NYK6 297 aa23.41■■□□□ 1.34
NKX2-1-201ENST00000354822 LGALS2P05162 132 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 PECAM1P16284 738 aaPredicted RBP23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 LINC01465Q8N7H1 131 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 CXorf38Q8TB03 319 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 MCRS1Q96EZ8 462 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 MIS12Q9H081 205 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 UBN1Q9NPG3 1134 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 NKIRAS1Q9NYS0 192 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 KIAA1257Q9ULG3 409 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 COL1A2P08123 1366 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 A0A087WZ62 844 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 RNF8O76064 485 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 GH1P01241 217 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 CREB1P16220 341 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 MYO1EQ12965 1108 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 MKRN3Q13064 507 aaKnown RBP23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 TMEM63BQ5T3F8 832 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 FBXW10Q5XX13 1052 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 CYP4F22Q6NT55 531 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 NT5DC4Q86YG4 428 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 CYP4X1Q8N118 509 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 ARFGAP1Q8N6T3 406 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 ACSF2Q96CM8 615 aaPredicted RBP23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 SLC10A4Q96EP9 437 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 FDXACB1Q9BRP7 624 aaPredicted RBP23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 TMEM121Q9BTD3 319 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 PDZD7Q9H5P4 517 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 ZWILCHQ9H900 591 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 PNMA3Q9UL41 463 aa23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.4■■□□□ 1.34
NKX2-1-201ENST00000354822 EXOC1LA0A1B0GW35 172 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 MICAL2O94851 1124 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 ETS1P14921 441 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 CMASQ8NFW8 434 aaPredicted RBP23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 MGARPQ8TDB4 240 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 ZBTB10Q96DT7 871 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 ELOVL4Q9GZR5 314 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 SMYD3Q9H7B4 428 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 VTA1Q9NP79 307 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 ASNSD1Q9NWL6 643 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 TBK1Q9UHD2 729 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 AKT3Q9Y243 479 aa23.39■■□□□ 1.33
NKX2-1-201ENST00000354822 IQCA1LA6NCM1 817 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 SMAPO00193 183 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 DNM1LO00429 736 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 CST8O60676 142 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 STAU1O95793 577 aaKnown RBP23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 ERBB2P04626 1255 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 PPTC7Q8NI37 304 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 ACTL9Q8TC94 416 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 MAML1Q92585 1016 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 HAUS1Q96CS2 278 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 HPDLQ96IR7 371 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 METTL5Q9NRN9 209 aaKnown RBP23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 ITGA11Q9UKX5 1188 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 C2CD2Q9Y426 696 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 MCM3APO60318 1980 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 EVPLQ92817 2033 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 SNX3O60493 162 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 IFNB1P01574 187 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 CETPP11597 493 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 IL1R2P27930 398 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 SCTRP47872 440 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 CCNA1P78396 465 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 OTUD4Q01804 1114 aaKnown RBP23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 TMEM132DQ14C87 1099 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 LRRC14Q15048 493 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 RASA2Q15283 850 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 SLC10A6Q3KNW5 377 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 KIAA0319LQ8IZA0 1049 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 ANKRD42Q8N9B4 389 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 KCTD6Q8NC69 237 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms