RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TJP2Q9UDY2 1190 aa8.34□□□□□ -1.07
SCN8A-201ENST00000354534 CDY2AQ9Y6F7 541 aa8.34□□□□□ -1.07
SCN8A-201ENST00000354534 CDY1Q9Y6F8 540 aa8.34□□□□□ -1.07
SCN8A-201ENST00000354534 LOC100506127A0A0U1RQW1 187 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 TSPAN19P0C672 248 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.08
SCN8A-201ENST00000354534 SH2D3CQ8N5H7 860 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 SH3TC2Q8TF17 1288 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 RORBQ92753 470 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 COPS7BQ9H9Q2 264 aaPredicted RBP8.34□□□□□ -1.08
SCN8A-201ENST00000354534 RIC8BQ9NVN3 520 aa8.34□□□□□ -1.08
SCN8A-201ENST00000354534 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.08
SCN8A-201ENST00000354534 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 GCLCP48506 637 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 RPS6KA3P51812 740 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PSMC5P62195 406 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 C4orf33Q8N1A6 199 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 FAM210AQ96ND0 272 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ZNF112Q9UJU3 913 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 DUSP12Q9UNI6 340 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 FAM47DPA6NHR8 397 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 AXIN1O15169 862 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 HLA-DQA2P01906 255 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 BCAR1P56945 870 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CHI3L2Q15782 390 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ZNF667Q5HYK9 610 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 IL31Q6EBC2 164 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TSPAN14Q8NG11 270 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TPD52L3Q96J77 140 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MAML3Q96JK9 1138 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ABHD10Q9NUJ1 306 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TMCO1Q9UM00 188 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PLOD2O00469 737 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PEX3P56589 373 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 POU4F1Q01851 419 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 DGKDQ16760 1214 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TMEM270Q6UE05 265 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 EIF3MQ7L2H7 374 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CDK20Q8IZL9 346 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 OTUD7AQ8TE49 926 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TLR7Q9NYK1 1049 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 USP17L21D6R901 530 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ULK1O75385 1050 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CNPP09543 421 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 JAK1P23458 1154 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 IST1P53990 364 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 RGS21Q2M5E4 152 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 LRRC17Q8N6Y2 441 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PNKPQ96T60 521 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ELL3Q9HB65 397 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 GPC6Q9Y625 555 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 GNA15P30679 374 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PDCD4Q53EL6 469 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 R3HCC1LQ7Z5L2 792 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 KBTBD2Q8IY47 623 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ANAPC2Q9UJX6 822 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ARHGEF10O15013 1369 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 NCK2O43639 380 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MYL3P08590 195 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 LSP1P33241 339 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CASP12Q6UXS9 341 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CDKL3Q8IVW4 592 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 RIOK2Q9BVS4 552 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MANSC1Q9H8J5 431 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CLRN2A0PK11 232 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 GRID2IPA4D2P6 1211 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CCT8L1PA6NM43 557 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ATP9AO75110 1047 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CYP7B1O75881 506 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 LCP1P13796 627 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CASP5P51878 434 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CDH6P55285 790 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 NME5P56597 212 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 RESTQ13127 1097 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 KBTBD12Q3ZCT8 623 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 EID3Q8N140 333 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MS4A14Q96JA4 679 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 HDAC6Q9UBN7 1215 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MRPS7Q9Y2R9 242 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 FAM220BPB1ANY3 271 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PSME3P61289 254 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 Q4G0T1 1027 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 LRRC70Q7Z2Q7 622 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 PDS5AQ29RF7 1337 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
SCN8A-201ENST00000354534 TNPO2O14787 897 aaKnown RBP8.33□□□□□ -1.08
SCN8A-201ENST00000354534 MYL12BO14950 172 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms