RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ACAP3Q96P50 834 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 OSBPL1AQ9BXW6 950 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PRM3Q9NNZ6 103 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 KLK14Q9P0G3 267 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 LOC100653049A0A140TA62 436 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 RGL2O15211 777 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 KRT34O76011 436 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ESRRAP11474 423 aaPredicted RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 ELK3P41970 407 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 GCNT1Q02742 428 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PTK7Q13308 1070 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 CCNG2Q16589 344 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 BBOF1Q8ND07 529 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 TTC8Q8TAM2 541 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
LMX1A-202ENST00000342310 KDM4CQ9H3R0 1056 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
LMX1A-202ENST00000342310 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 CREB3O43889 395 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 CAPRIN2Q6IMN6 1127 aaKnown RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 SCN7AQ01118 1682 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 RGS20O76081 388 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 BCAR1P56945 870 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 PDE1BQ01064 536 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 LMNB2Q03252 620 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 ACOT1Q86TX2 421 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 ARID3BQ8IVW6 561 aaPredicted RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 RCOR2Q8IZ40 523 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 MIEF2Q96C03 454 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 SYT11Q9BT88 431 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 ROPN1BQ9BZX4 212 aaPredicted RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 NIF3L1Q9GZT8 377 aa13.15□□□□□ -0.3
LMX1A-202ENST00000342310 ROPN1Q9HAT0 212 aaPredicted RBP13.15□□□□□ -0.3
LMX1A-202ENST00000342310 TRIM49D1C9J1S8 452 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 COPEO14579 308 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 NPTXRO95502 500 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 CALB1P05937 261 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 TXNP10599 105 aaKnown RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 UNGP13051 313 aaPredicted RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 GTF2A2P52657 109 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 SIX1Q15475 284 aaPredicted RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 CKAP2Q8WWK9 683 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 HAPLN2Q9GZV7 340 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 I3L4J1 428 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 ASAP2O43150 1006 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 EDN1P05305 212 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 PTPRAP18433 802 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 RASSF2P50749 326 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 ARFIP2P53365 341 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 RABGGTBP53611 331 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 KCTD2Q14681 263 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 KBTBD12Q3ZCT8 623 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 FNBP1LQ5T0N5 605 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 DCLK2Q8N568 766 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 MAGEB5Q9BZ81 275 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 LIASO43766 372 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 NFICP08651 508 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 KCNA2P16389 499 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 TAC1P20366 129 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 SERPINB3P29508 390 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 PTK6Q13882 451 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
LMX1A-202ENST00000342310 PTPN20Q4JDL3 420 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 MSS51Q4VC12 460 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 ATF7IP2Q5U623 682 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 FAM160B1Q5W0V3 765 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 CPXM1Q96SM3 734 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 APOL2Q9BQE5 337 aa13.14□□□□□ -0.31
LMX1A-202ENST00000342310 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms