RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 B3GNT5Q9BYG0 378 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 ABCB6Q9NP58 842 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 ATP8B3O60423 1300 aa18.98■□□□□ 0.63
SDCBP2-201ENST00000339987 WDR27A2RRH5 827 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 C1RP00736 705 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 CCDC130P13994 396 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 CHRNB2P17787 502 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 IRS1P35568 1242 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 ARPP19P56211 112 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 FMO1Q01740 532 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 PTPROQ16827 1216 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 CFAP221Q4G0U5 840 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 PAQR9Q6ZVX9 377 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 ZNF571Q7Z3V5 609 aaPredicted RBP18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 FAM35AQ86V20 835 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 OLIG1Q8TAK6 271 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 SLC2A14Q8TDB8 520 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 MICAL1Q8TDZ2 1067 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 KLHL5Q96PQ7 755 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 MAFFQ9ULX9 164 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 PCDHB5Q9Y5E4 795 aa18.97■□□□□ 0.63
SDCBP2-201ENST00000339987 TRIOBPQ9H2D6 2365 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 MTMR11A4FU01 709 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 HIDE1A8MVS5 230 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 ABLIM3O94929 683 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 PTMAP06454 111 aaKnown RBP18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 ADH1AP07327 375 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 MMEP08473 750 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 CA8P35219 290 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 CYP27A1Q02318 531 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 GOLGA7BQ2TAP0 167 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 TAF3Q5VWG9 929 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 CYP26C1Q6V0L0 522 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 SPATA2LQ8IUW3 424 aaPredicted RBP18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 TMEM139Q8IV31 216 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 ANKRD52Q8NB46 1076 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 ZNF461Q8TAF7 563 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 SPPL2BQ8TCT7 592 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 CHP1Q99653 195 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 MED10Q9BTT4 135 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 HESX1Q9UBX0 185 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 AFF4Q9UHB7 1163 aaKnown RBP18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 TSPAN16Q9UKR8 245 aa18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 RANBP2P49792 3224 aaKnown RBP18.96■□□□□ 0.63
SDCBP2-201ENST00000339987 SOX1O00570 391 aaPredicted RBP18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 MICAL2O94851 1124 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 VNN2O95498 520 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 PLEKP08567 350 aaPredicted RBP18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 TNFAIP3P21580 790 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 ADORA2BP29275 332 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 EIF4A3P38919 411 aaKnown RBP18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 PKDCCQ504Y2 493 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 HABP4Q5JVS0 413 aaKnown RBP18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 RNF19BQ6ZMZ0 732 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 VPS36Q86VN1 386 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 TMTC1Q8IUR5 882 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 LRRC8AQ8IWT6 810 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 CCDC112Q8NEF3 446 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 SMARCD1Q96GM5 515 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 ZNF518BQ9C0D4 1074 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 LHX5Q9H2C1 402 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 HSFX1Q9UBD0 423 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 PCDHGC5Q9Y5F6 944 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 PTPRDP23468 1912 aa18.95■□□□□ 0.62
SDCBP2-201ENST00000339987 RFXAPO00287 272 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 CLDN5O00501 218 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 LSM8O95777 96 aaKnown RBP18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 CDH5P33151 784 aaPredicted RBP18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 MAGEA11P43364 429 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 BCAT1P54687 386 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 DENND1BQ6P3S1 775 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 TTC30AQ86WT1 665 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 GLYCTKQ8IVS8 523 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 PGLYRP2Q96PD5 576 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 DUSP16Q9BY84 665 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 PDCL3Q9H2J4 239 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 NHEJ1Q9H9Q4 299 aaPredicted RBP18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 KRT82Q9NSB4 513 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 ABI2Q9NYB9 513 aaPredicted RBP18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 LMCD1Q9NZU5 365 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 CEP83Q9Y592 693 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 ATG2AQ2TAZ0 1938 aa18.94■□□□□ 0.62
SDCBP2-201ENST00000339987 M0QYV0 167 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 CSPG5O95196 566 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 CFHP08603 1231 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 FAM200BP0CF97 657 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 SETSIPP0DME0 302 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 ATF2P15336 505 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 KLRC2P26717 231 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 BST2Q10589 180 aaKnown RBP18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 ASTE1Q2TB18 679 aaPredicted RBP18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 LILRA6Q6PI73 481 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 VSTM1Q6UX27 236 aa18.93■□□□□ 0.62
SDCBP2-201ENST00000339987 CCDC170Q8IYT3 715 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms