RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
SFN-201ENST00000339276 PCDHB4Q9Y5E5 795 aa17.8■□□□□ 0.44
SFN-201ENST00000339276 SPTBN5Q9NRC6 3674 aaKnown RBP17.79■□□□□ 0.44
SFN-201ENST00000339276 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 TEX33O43247 280 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 MBTPS2O43462 519 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 PAPLNO95428 1278 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 SERPINC1P01008 464 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 HNRNPA1P09651 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
SFN-201ENST00000339276 ATF6P18850 670 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 BDNFP23560 247 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 GPR15P49685 360 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 FANCCQ00597 558 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 ITIH3Q06033 890 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 SMAD4Q13485 552 aaKnown RBP17.79■□□□□ 0.44
SFN-201ENST00000339276 SYCP1Q15431 976 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 PTPN21Q16825 1174 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 ARHGAP44Q17R89 818 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 KLHDC7AQ5VTJ3 777 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 TMEM270Q6UE05 265 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 RTL10Q7L3V2 364 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 GPR149Q86SP6 731 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 SMG7Q92540 1137 aaKnown RBP17.79■□□□□ 0.44
SFN-201ENST00000339276 TMEM176AQ96HP8 235 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 FUBP3Q96I24 572 aaKnown RBP eCLIP17.79■□□□□ 0.44
SFN-201ENST00000339276 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 USP15Q9Y4E8 981 aaPredicted RBP17.79■□□□□ 0.44
SFN-201ENST00000339276 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
SFN-201ENST00000339276 TUFMP49411 452 aaKnown RBP17.78■□□□□ 0.44
SFN-201ENST00000339276 KCNQ1P51787 676 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 MFAP3P55082 362 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 FILIP1LQ4L180 1135 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 IQCEQ6IPM2 695 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 CES5AQ6NT32 575 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 PAQR9Q6ZVX9 377 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 ENOSF1Q7L5Y1 443 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 FUKQ8N0W3 1084 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 RBBP8NLQ8NC74 664 aaPredicted RBP17.78■□□□□ 0.44
SFN-201ENST00000339276 STKLD1Q8NE28 680 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 SLC2A14Q8TDB8 520 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 ERGIC2Q96RQ1 377 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 MED10Q9BTT4 135 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 GANQ9H2C0 597 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 PLCB1Q9NQ66 1216 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 FAM207AQ9NSI2 230 aaPredicted RBP17.78■□□□□ 0.44
SFN-201ENST00000339276 CEP72Q9P209 647 aa17.78■□□□□ 0.44
SFN-201ENST00000339276 RNF225M0QZC1 329 aaPredicted RBP17.77■□□□□ 0.44
SFN-201ENST00000339276 EPHB6O15197 1021 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 XYLBO75191 536 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 KRT5P13647 590 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 UCHL3P15374 230 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 TRIM21P19474 475 aaKnown RBP17.77■□□□□ 0.44
SFN-201ENST00000339276 ADORA2BP29275 332 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 MAGEA11P43364 429 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 ALDH1A3P47895 512 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 CACNA2D1P54289 1103 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 DDR2Q16832 855 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 SDHAF4Q5VUM1 108 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
SFN-201ENST00000339276 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 GPR152Q8TDT2 470 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 SUSD6Q92537 303 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 JAKMIP2Q96AA8 810 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 FAM81BQ96LP2 452 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
SFN-201ENST00000339276 HEXIM2Q96MH2 286 aaKnown RBP17.77■□□□□ 0.44
SFN-201ENST00000339276 PIDD1Q9HB75 910 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 TMEM30AQ9NV96 361 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 HCFC1R1Q9NWW0 138 aa17.77■□□□□ 0.44
SFN-201ENST00000339276 DENND4AQ7Z401 1863 aa17.77■□□□□ 0.43
SFN-201ENST00000339276 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 NOL4O94818 638 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 CALCAP01258 141 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 POU2F2P09086 479 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
SFN-201ENST00000339276 ZNF132P52740 706 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 NTHL1P78549 312 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 PLD1Q13393 1074 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 PPP1R26Q5T8A7 1209 aaPredicted RBP17.76■□□□□ 0.43
SFN-201ENST00000339276 VSTM1Q6UX27 236 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 GRASPQ7Z6J2 395 aaPredicted RBP17.76■□□□□ 0.43
SFN-201ENST00000339276 GAS2L3Q86XJ1 694 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 SHC3Q92529 594 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 CYFIP2Q96F07 1278 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 NAA15Q9BXJ9 866 aaKnown RBP17.76■□□□□ 0.43
SFN-201ENST00000339276 DNAI2Q9GZS0 605 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 KRT82Q9NSB4 513 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 CNTN6Q9UQ52 1028 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 ATP8B3O60423 1300 aa17.76■□□□□ 0.43
SFN-201ENST00000339276 IL9P15248 144 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 CD19P15391 556 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 GRIK1P39086 918 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 MTHFRP42898 656 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 EPHB3P54753 998 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 UBASH3AP57075 661 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
SFN-201ENST00000339276 MRPS5P82675 430 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms